Transcription Factor

						

			
Accessions: T025981_1.02 (CISBP 1.02), JUND_MOUSE (HOCOMOCO 10)

			
Names: Jund, T025981_1.02;, JUND_MOUSE
Organisms: Mus musculus
Libraries: CISBP 1.02 1, HOCOMOCO 10 2
1 Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. [Pubmed]

2 Kulakovskiy IV, Vorontsov IE, Yevshin IS, Soboleva AV, Kasianov AS, Ashoor H, Ba-Alawi W, Bajic VB, Medvedeva YA, Kolpakov FA, Makeev VJ. HOCOMOCO: expansion and enhancement of the collection of transcription factor binding sites models. Nucleic Acids Res : (2016). [Pubmed]
Notes: experiment type:PBM, family:bZIP
Length: 341
Pfam Domains:     1-251 Jun-like transcription factor
  260-322 bZIP transcription factor
  265-320 Basic region leucine zipper
Sequence: 
(in bold interface residues)		   1 METPFYGEEALSGLAAGASSVAGATGAPGGGGFAPPGRAFPGAPPTSSMLKKDALTLSLA   60
  61 EQGAAGLKPGSATAPSALRPDGAPDGLLASPDLGLLKLASPELERLIIQSNGLVTTTPTS  120
 121 TQFLYPKVAASEEQEFAEGFVKALEDLHKQSQLGAATAATSGAPAPPAPADLAATPGATE  180
 181 TPVYANLSSFAGGAGPPGGAATVAFAAEPVPFPPPPGALGPPPPPHPPRLAALKDEPQTV  240
 241 PDVPSFGDSPPLSPIDMDTQERIKAERKRLRNRIAASKCRKRKLERISRLEEKVKTLKSQ  300
 301 NTELASTASLLREQVAQLKQKVLSHVNSGCQLLPQHQVPAY
Interface Residues: 268, 269, 272, 273, 275, 276, 279, 280, 283
3D-footprint Homologues: 7x5e_E, 7x5e_F, 2wt7_A, 2wt7_B, 1skn_P, 4eot_A, 1nwq_C, 2dgc_A, 5t01_B, 1gd2_G, 5vpe_C, 5vpe_D, 1dh3_C
Binding Motifs: M0320_1.02 rTGACkCAh
JUND_MOUSE.H10MO.A|M01182 grTGAGTCAyc
			
Related annotations: PaperBLAST

	
			


			

				

				
				
				
				

			

			

		

	
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