Transcription Factor
| Accessions: | T014176_1.02 (CISBP 1.02) |
| Names: | T014176_1.02;, USF2 |
| Organisms: | Homo sapiens |
| Libraries: | CISBP 1.02 1 1 Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. [Pubmed] |
| Notes: | experiment type:ChIP-seq, family:bHLH |
| Length: | 338 |
| Pfam Domains: | 236-282 Helix-loop-helix DNA-binding domain |
| Sequence: (in bold interface residues) | 1 MDMLDPGLDPAASATAAAAASHDKGPEAEEGVELQEGGDGPGAEEQTAVAITSVQQAAFG 60 61 DHNIQYQFRTETNGGQVTYRVVQVTDGQLDGQGDTAGAVSVVSTAAFAGGQQAVTQVGVD 120 121 GAAQRPGPAAASVPPGPAAPFPLAVIQNPFSNGGSPAAEAVSGEARFAYFPASSVGDTTA 180 181 VSVQTTDQSLQAGGQFYVMMTPQDVLQTGTQRTIAPRTHPYSPKIDGTRTPRDERRRAQH 240 241 NEVERRRRDKINNWIVQLSKIIPDCNADNSKTGAACDYIRELRQTNQRMQETFKEAERLQ 300 301 MDNELLRQQIEELKNENALLRAQLQQHNLEMVGEGTRQ |
| Interface Residues: | 237, 239, 240, 241, 243, 244, 247, 248, 269 |
| 3D-footprint Homologues: | 1a0a_B, 1an4_A, 1am9_A, 7f2f_B, 5eyo_A, 5v0l_A, 7rcu_E, 5gnj_I, 6g1l_A, 4h10_A, 7ssa_L, 5i50_B, 7d8t_A, 4zpk_A, 7xi3_A, 5nj8_D, 8osl_P |
| Binding Motifs: | M4481_1.02 gGTCACGTGrsssss |
| Related annotations: | PaperBLAST |
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