Transcription Factor
Accessions: | T03747 (AthalianaCistrome v4_May2016) |
Names: | AT1G18960, T03747; |
Organisms: | Arabidopsis thaliana |
Libraries: | AthalianaCistrome v4_May2016 1 1 O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed] |
Notes: | ecotype:Col-0, experiment type: DAP-seq, family:MYB-related |
Length: | 307 |
Pfam Domains: | 62-103 Myb-like DNA-binding domain 63-110 Myb-like DNA-binding domain |
Sequence: (in bold interface residues) | 1 MVRSCSSKSKNPWTNEEDTTQKFVFASASKNGCAAPKKIGLRRCGKSCRVRKTDHSGTKH 60 61 ESFTSEDEDLIIKMHAAMGSRWQLIAQHLPGKTEEEVKMFWNTKLKKKLSEMGIDHVTHR 120 121 PFSHVLAEYGNINGGGNLNPNPSNQAGSLGRNHSLNDDGHQQQPNDSGDLMFHLQAIKLM 180 181 TDSSNQVKPESTFVYASSSSSNSSPPLFSSTCSTIAQENSEVNFTWSDFLLDQETFHENQ 240 241 QNHPQELDSLFGNDFSEVTAATMANTSTVPSQIEEESLSNGFVESIIAKEKEFFLGFPSY 300 301 LEQPFHF |
Interface Residues: | 46, 49, 50, 54, 55, 94, 95, 98, 99, 102, 103, 104 |
3D-footprint Homologues: | 6kks_A, 1mse_C, 3osg_A, 3zqc_A |
Binding Motifs: | M0620 yaahawhwwCAmCAACawyahh |
Related annotations: | PaperBLAST |
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.