Transcription Factor

						

			
Accessions: T138268_1.02 (CISBP 1.02)

			
Names: Rela, T138268_1.02;
Organisms: Mus musculus
Libraries: CISBP 1.02 1
1 Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. [Pubmed]
Notes: experiment type:ChIP-seq, family:Rel
Length: 499
Pfam Domains:    96-136 Rel homology domain (RHD)
Sequence: 
(in bold interface residues)		   1 MWRSSNSRSNGACDSAINARGAQRAVFLAREAQIPPRHTPPSRSMATQDQEQFESPWSPR   60
  61 IHLTGLIHMNLWGRTAGMATMRLTSAQTAVSIVPIEEQRGDYDLNAVRLCFQVTVRDPAG  120
 121 RPLLLTPVLSHPIFDNRAPNTAELKICRVNRNSGSCLGGDEIFLLCDKVQKEDIEVYFTG  180
 181 PGWEARGSFSQADVHRQVAIVFRTPPYADPSLQAPVRVSMQLRRPSDRELSEPMEFQYLP  240
 241 DTDDRHRIEEKRKRTYETFKSIMKKSPFNGPTEPRPPTRRIAVPTRNSTSVPKPAPQPYT  300
 301 FPASLSTINFDEFSPMLLPSGQISNQALALAPSSAPVLAQTMVPSSAMVPLAQPPAPAPV  360
 361 LTPGPPQSLSAPVPKSTQAGEGTLSEALLHLQFDADEDLGALLGNSTDPGVFTDLASVDN  420
 421 SEFQQLLNQGVSMSHSTAEPMLMEYPEAITRLVTGSQRPPDPAPTPLGTSGLPNGLSGDE  480
 481 DFSSIADMDFSALLSQISS
Interface Residues: 106, 137, 139, 168, 196
3D-footprint Homologues: 1a66_A, 1imh_C, 9bdw_A, 1a3q_A, 1nfk_A, 2o61_A, 1gji_A, 7cli_B
Binding Motifs: M6137_1.02 kGGraTTTCCm
			
Related annotations: PaperBLAST

	
			


			

				

				
				
				
				

			

			

		

	
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