Transcription Factor
| Accessions: | T075008_1.02 (CISBP 1.02) |
| Names: | dmd-4, T075008_1.02; |
| Organisms: | Caenorhabditis elegans |
| Libraries: | CISBP 1.02 1 1 Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. [Pubmed] |
| Notes: | experiment type:PBM, family:DM |
| Length: | 260 |
| Pfam Domains: | 18-64 DM DNA binding domain 143-181 DMRTA motif |
| Sequence: (in bold interface residues) | 1 MMIGNLHVFPNGRIERERKPKCARCRNHGLVSWLKGHKRHCKYKECACEKCNLIAERQRV 60 61 MAAQVALKRRQATEDAIALGLRVVAGQAIDRLPQGPVWNTAGGEDEDMDYLDEEIEEKPP 120 121 TPVSEELVPLKRKKVEETYELSSFSPIELLMTLFCEHEKHVLELVLEACHGNVLQAIEHF 180 181 ANVRRVKNINQMKLFAAATRMDHVFPNMTNFILPKQSFLIDSLLEQPTFPVSSQASTSTK 240 241 TCDSSSVDSISPNSSTFESS |
| Interface Residues: | 18, 57, 61, 64, 65, 68, 69 |
| 3D-footprint Homologues: | 4yj0_C |
| Binding Motifs: | M0622_1.02 wwgTAtcwww |
| Related annotations: | PaperBLAST |
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