Transcription Factor

						

			
Accessions: T107638_1.02 (CISBP 1.02)

			
Names: IRF6, T107638_1.02;
Organisms: Meleagris gallopavo
Libraries: CISBP 1.02 1
1 Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. [Pubmed]
Notes: experiment type:PBM, family:IRF
Length: 460
Pfam Domains:     7-115 Interferon regulatory factor transcription factor
  217-401 Interferon-regulatory factor 3
Sequence: 
(in bold interface residues)		   1 MALHPRRVRLKPWLVAQVDSGMYPGLIWLNREAKRFQIPWKHATRHSPQHEEENTIFKAW   60
  61 AVETGKYQEGVDEPDPAKWKAQLRCALNKSREFNLMYDGTKEVPMNPVKIYEVCDIPQSQ  120
 121 GSIINPGSTGSAPWDEKENDLDDDEEEELNPSQHVPIQETFPFLNINDSPMAPASAENCS  180
 181 PEAVWPKNEPLDMEMPPTALQHDFFSSPELWISSLPMTDLEIKFEYRGKETGQTTTVSNP  240
 241 QGCRLFYGELGPMPDQEELFGPINLEQVRFPGTEQITNEKQKIFTSRLLDVMDRGLILEV  300
 301 SGHAIYAVRLCQCKVYWSGPCAPSATTPNLIERQKKVKLFCLETFLSELIAHQKGQIEKQ  360
 361 PPFEIYFCFGEEWPDGKPRERKLIVVQVIPVVARMIYEMFSGDFTRSFDSGSVRLQISTP  420
 421 DIKDNIVAHLKQLYRLLQTHQEGWPMQAPTMHMAQPLPAQ
Interface Residues: 42, 44, 77, 81, 82, 84, 85, 88, 89
3D-footprint Homologues: 2pi0_B, 1if1_B, 2o61_A, 2irf_L, 7oot_B
Binding Motifs: M1261_1.02 rayCGAwACy
			
Related annotations: PaperBLAST

	
			


			

				

				
				
				
				

			

			

		

	
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