Transcription Factor
Accessions: | T083529_1.02 (CISBP 1.02) |
Names: | FoxJ2, T083529_1.02; |
Organisms: | Strongylocentrotus purpuratus |
Libraries: | CISBP 1.02 1 1 Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. [Pubmed] |
Notes: | experiment type:PBM, family:Forkhead |
Length: | 483 |
Pfam Domains: | 63-149 Fork head domain |
Sequence: (in bold interface residues) | 1 MEWLGQLNIPASLNGNSPNGKNGPGSTNSLDPSKGTIPMRKSPSSPLDTSATWDEQQPVK 60 61 DGKPPYSYANLITFAINSSPKKKMTLSEIYQWICENFPYYREAGNGWKNSIRHNLSLNKC 120 121 FMKVPRSKDDPGKGSYWAIDNNPQDDSLRKKRRHPGMSPYSPEESLESSGGSIGSVIVTP 180 181 AFPNNHFASPPHSHLSNSGDQRLFESNPNIXDLSASFRSLYKKVFDNPQGDVGDIIAQYK 240 241 LQLEQSNSSQGLNQQQGGVFNNSQGSISSLNNNQHQQLNQQQQQQVLQQSQQQPLQLSLG 300 301 NTDWMNNLDILKESVRVASSYNFSDLDLSQFAGLMESMRQADSKNWSLQPGQFADLAESL 360 361 NNFFQQTGVAGFLNTSRGSGGGSAFSDSPHSSISNSTTGGGGFLMGSPPLLSPNSSHQSL 420 421 GVPSPVMGMGHNNLSPTMVPQPHQGTSPNAHMQRVVHQSVLPRRTTDFPDDDIEDNFPWD 480 481 TIA |
Interface Residues: | 60, 106, 108, 109, 110, 112, 113, 114, 116, 117, 126, 133, 153 |
3D-footprint Homologues: | 7yzb_A, 7vox_H, 2hdc_A, 3g73_A, 7yz7_A, 6el8_A, 7tdx_A, 3l2c_A, 6nce_A, 2uzk_A, 7vou_C, 2a07_J, 7yze_A, 7cby_C, 3co6_C, 6ako_C, 2c6y_A, 7yzg_A, 7tdw_A, 3qrf_G |
Binding Motifs: | M0756_1.02 gwmaACaaa |
Related annotations: | PaperBLAST |
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.