Transcription Factor

						

			
Accessions: T24892 (AthalianaCistrome v4_May2016)

			
Names: At5g05790, T24892;
Organisms: Arabidopsis thaliana
Libraries: AthalianaCistrome v4_May2016 1
1 O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]
Notes: ecotype:Col-0, experiment type: DAP-seq, family:MYB-related
Length: 277
Pfam Domains:   132-176 Myb-like DNA-binding domain
  133-177 Myb-like DNA-binding domain
Sequence: 
(in bold interface residues)		   1 METLHPLLSHVPTSDHRFVVQEMMCLQSSSWTKEENKKFERALAVYADDTPDRWFKVAAM   60
  61 IPGKTISDVMRQYSKLEEDLFDIEAGLVPIPGYRSVTPCGFDQVVSPRDFDAYRKLPNGA  120
 121 RGFDQDRRKGVPWTEEEHRRFLLGLLKYGKGDWRNISRNFVGSKTPTQVASHAQKYYQRQ  180
 181 LSGAKDKRRPSIHDITTVNLLNANLSRPSSDHGCLVSKQAEPKLGFTDRDNAEEGVMFLG  240
 241 QNLSSVFSSYDPAIKFSGANVYGEGGYCISQDLETRK
Interface Residues: 66, 70, 71, 165, 167, 168, 171
3D-footprint Homologues: 7xur_A, 2kdz_A
Binding Motifs: M0610 awycTTATCytcwtm
			
Related annotations: PaperBLAST

	
			


			

				

				
				
				
				

			

			

		

	
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