Transcription Factor
| Accessions: | T161773_1.02 (CISBP 1.02) |
| Names: | NCU05294, T161773_1.02; |
| Organisms: | Neurospora crassa |
| Libraries: | CISBP 1.02 1 1 Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. [Pubmed] |
| Notes: | experiment type:PBM, family:Zinc cluster |
| Length: | 995 |
| Pfam Domains: | 62-97 Fungal Zn(2)-Cys(6) binuclear cluster domain 393-632 Fungal specific transcription factor domain |
| Sequence: (in bold interface residues) | 1 MDSTGAGSSPEKSSSPDPKPPVSSSEANTGTGASASAGTGATASGSQEDPPKKAPVRKRT 60 61 KTGCLTCRKRRIKCDEAKPICNNCTKSKRQCEGYNQRLTFKEPLSSYGHGSNHFGHPVYH 120 121 QQNRNQPIGAPLTATQAKAAAQQGSLAAIAPKPPQADFTGTVPMSFAAPQRQHQTHHPFL 180 181 AAQAGGPASQTSFYGQLPSPSQSVSSVGPPPPPGCLPQHAYESTFQLMSPTHGYEPNRVI 240 241 EAGSSNYSHAWTATSKQHRRIIEEDDGLQPDDNGFVKEETYWQSDDEASMADSEDEDIPM 300 301 DVHDAHLESNDLGIHVARRLIAPADAYGVQMRTVAGFPEMNVLQTYIPSSMSSPLNDSQT 360 361 AAVFWYFVNVTGQSMSLYERHPFDPTPMFHGQPVPKTRQHIWTYIFPIMAFNHPALMQAI 420 421 LALASLQIANLARVPATAAMKHYHLCLRRIARNYQSPSRRTQPATLAATLLLGYYEVWNS 480 481 DHDKWCRHMWGAHAIMKEIPFLKMTKEIFAHQRERRPTASLGPDLALYEVDTELISQLTG 540 541 KKVTYDDPEVASKQRPYTEKDLETYQQLRDLYWWYCKMDVYQSILGGTRLFMPYDQWAQC 600 601 APRGECGRMDAIYGTFDHLMLLLGRVANFASRDLARKRKARRAGGPPGSAGRGQGPPAHG 660 661 PPGQGPPPGHGGPPQGGPPSSSSSSSSSSAGRGQSPPLFAGLMPTKGTFIPPQGFSPRRD 720 721 PTTPDTDSTDDMDYDTATLAAFREWDEIRSAFDLFKSRLGPDFAPMGPDLATPEMTPFGP 780 781 ALMYRTYSIAGIWMNYYMGLIALQRAHPAMPPVAMIAAGMSAGQTAPWANTIARIAAGLH 840 841 EDTSHVSAVSTLVGAAFIESGFCLFVAGIQFQEPPQRHWLISRLHDMARLTGWQSARQIA 900 901 DGCESGWMKAAEMGRGPPYRRLSSSSSSSFSGSSSSNSSGFLPIWMRPRRIDKKIREEQA 960 961 GENRLVLARTEHAHFALGLLTVEQDLDRLELSEGE |
| Interface Residues: | 57, 58, 68, 70, 71, 72, 73, 86, 87 |
| 3D-footprint Homologues: | 1f5e_P, 1pyi_A, 6o19_A, 2er8_C, 1hwt_C, 1d66_B, 1zme_D, 7uik_T, 3coq_A |
| Binding Motifs: | M1742_1.02 ttwasCGAr |
| Related annotations: | PaperBLAST |
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.