Transcription Factor
| Accessions: | 6sdg_A (3D-footprint 20231221) |
| Names: | A0A0G3FH20_MARPO, Auxin response factor |
| Organisms: | Marchantia aquatica, Marchantia polymorpha (Liverwort) |
| Libraries: | 3D-footprint 20231221 1 1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed] |
| Uniprot: | A0A0G3 |
| Length: | 318 |
| Pfam Domains: | 93-194 B3 DNA binding domain 212-294 Auxin response factor |
| Sequence: (in bold interface residues) | 1 IDAELWYACAGPQKALPPVGSVVAYLPQGHIEQVASFNNQELDAQIPRYNLPAVIPCMLN 60 61 DIQLSADPDSDEVYATLTLCPMSEQPKRKSRSFTKTLTVSDTSTHGGFSVPRRAADDCLP 120 121 KLDMSLNPPNQELVAKDLHGNEWRFRHIFRGQPKRHLLTTGWSVFVSQKRLVAGDAVLFL 180 181 RGENGQLRVGVRRAPRKVLTSPTMHIGVLAAAAHAATEKSRFSLIYNPRSCPSEFVIPYS 240 241 KYLKAVKSNFNVGQRFKMKFESEDPSDRRHTGTITGICDFDPARWPGSEWRSLQVNWDES 300 301 SSSERQERVSPWEVEPGN |
| Interface Residues: | 100, 105, 106, 107, 109, 150, 152, 153, 155, 156 |
| 3D-footprint Homologues: | 6sdg_B, 6ycq_A, 7et6_A, 6j9c_D |
| Binding Motifs: | 6sdg_AB tTGTcGGCnnnnnGCcnACA |
| Publications: | Kato H, Mutte SK, Suzuki H, Crespo I, Das S, Radoeva T, Fontana M, Yoshitake Y, Hainiwa E, van den Berg W, Lindhoud S, Ishizaki K, Hohlbein J, Borst JW, Boer DR, Nishihama R, Kohchi T, Weijers D. Design principles of a minimal auxin response system. Nat Plants 6:473-482 (2020). [Pubmed] |
| Related annotations: | PaperBLAST |
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