Transcription Factor
| Accessions: | Q39140 (JASPAR 2024) |
| Names: | AtbZIP45, bZIP transcription factor 45, TGA6_ARATH, Transcription factor TGA6 |
| Organisms: | Arabidopsis thaliana |
| Libraries: | JASPAR 2024 1 1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed] |
| Uniprot: | Q39140 |
| Length: | 330 |
| Pfam Domains: | 43-88 Basic region leucine zipper 46-86 bZIP transcription factor 127-205 Seed dormancy control |
| Sequence: (in bold interface residues) | 1 MADTSSRTDVSTDGDTDHRDLGSDRGHMHAAASDSSDRSKDKLDQKTLRRLAQNREAARK 60 61 SRLRKKAYVQQLENSRLKLTQLEQELQRARQQGVFISSSGDQAHSTGGNGALAFDAEHSR 120 121 WLEEKNRQMNELRSALNAHAGDTELRIIVDGVMAHYEELFRIKSNAAKNDVFHLLSGMWK 180 181 TPAERCFLWLGGFRSSELLKLLANQLEPMTERQVMGINSLQQTSQQAEDALSQGMESLQQ 240 241 SLADTLSSGTLGSSSSDNVASYMGQMAMAMGQLGTLEGFIRQADNLRLQTLQQMLRVLTT 300 301 RQSARALLAIHDYSSRLRALSSLWLARPRE |
| Interface Residues: | 26, 54, 57, 58, 61, 62, 66 |
| 3D-footprint Homologues: | 2pyl_A, 1dh3_C |
| Binding Motifs: | MA1069.1 kaTGACGTma MA1069.2 wwgaTGAyGTCAtcw MA1069.3 aTGAyGTCAt |
| Binding Sites: | MA1069.3.10 / MA1069.3.20 / MA1069.3.7 / MA1069.3.8 / MA1069.3.9 MA1069.1.2 MA1069.1.4 MA1069.1.18 MA1069.1.5 MA1069.1.3 MA1069.1.14 MA1069.1.1 MA1069.1.17 MA1069.1.7 MA1069.1.16 MA1069.1.6 MA1069.1.13 MA1069.1.12 MA1069.1.9 MA1069.1.11 MA1069.1.10 MA1069.1.15 MA1069.1.19 MA1069.1.20 MA1069.1.8 MA1069.2.1 MA1069.2.5 MA1069.2.2 MA1069.2.3 MA1069.2.7 MA1069.2.8 MA1069.2.9 MA1069.2.10 MA1069.2.11 MA1069.2.12 MA1069.2.13 MA1069.2.14 / MA1069.2.16 MA1069.2.15 / MA1069.2.17 MA1069.2.20 MA1069.2.18 / MA1069.2.19 MA1069.2.4 MA1069.2.6 MA1069.3.11 / MA1069.3.2 MA1069.3.12 / MA1069.3.3 MA1069.3.1 / MA1069.3.13 / MA1069.3.5 MA1069.3.14 / MA1069.3.16 MA1069.3.15 / MA1069.3.17 MA1069.3.18 / MA1069.3.19 MA1069.3.4 MA1069.3.6 |
| Publications: | Izawa T., Foster R., Chua N.-H. Plant bZIP protein DNA binding specificity.. J. Mol. Biol. 230:1131-1144 (1993). [Pubmed] |
| Related annotations: | PaperBLAST |
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.