Transcription Factor

						

			
Accessions: CsMYB60 (EEADannot 2025-01-07)

			
Names: CsV3_4G001130
Organisms: Cucumis sativus
Libraries: EEADannot 2025-01-07 1
1 Contreras-Moreira B, Sebastian A. FootprintDB: Analysis of Plant Cis-Regulatory Elements, Transcription Factors, and Binding Interfaces. Methods Mol Biol 1482:259-77 (2016) [Pubmed]
Notes: family:Tryptophan cluster factors MYB
Length: 313
Pfam Domains:     14-61 Myb-like DNA-binding domain
    17-75 Myb-like DNA-binding domain
   67-112 Myb-like DNA-binding domain
   71-117 Myb-like DNA-binding domain
Sequence: 
(in bold interface residues)		   1 MGRRPCCDKVGLKKGRWTEEEDDRLKKYILANGEGSWRSLPKNAGLLRCGKSCRLRWINY   60
  61 LRADLKRGNITSEEEDVIIKLHASLGNRWSLIASHLPGRTDNEIKNYWNSHLSRQIQTFR  120
 121 RRNDDGDSVIVDVARINLPPRRKGGRGRRRKEESEIPSPLTSEMERESGGCGGCVDEVRE  180
 181 EEIIKKTPEGRHDVGGSVTVNLNNDVWEEDEMSLDLDELLTSVEDYEDEIHKFITTGTCK  240
 241 SNTDHVSIAPAEMEVGGECSSISSSSLMSLDSPWNWESFAGDIEWDAGEDFGGGVGIAVA  300
 301 ESESEAVISWLLS
Interface Residues: 14, 49, 50, 51, 52, 54, 55, 59, 60, 102, 105, 106, 109
3D-footprint Homologues: 1vfc_A, 2kdz_A, 7xur_A
Binding Motifs: EEAD0149 yyTACCwAmyw
EEAD0150 ACCTAmy
			
Related annotations: PaperBLAST

	
			


			

				

				
				
				
				

			

			

		

	
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