Transcription Factor
| Accessions: | Q9LU92 (JASPAR 2024) |
| Names: | TGT4_ARATH, Trihelix DNA-binding protein GT-4, Trihelix transcription factor GT-4 |
| Organisms: | Arabidopsis thaliana |
| Libraries: | JASPAR 2024 1 1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed] |
| Uniprot: | Q9LU92 |
| Length: | |
| Binding Motifs: | MA1368.1 AACCATGGTTAAawywtaacm MA1368.2 wtTAACYATGGTTa MA1368.3 TAACYATGGTTa |
| Binding Sites: | MA1368.2.1 MA1368.2.10 MA1368.2.11 MA1368.2.12 MA1368.2.13 MA1368.2.14 MA1368.2.15 / MA1368.2.8 MA1368.2.16 MA1368.2.17 / MA1368.2.9 MA1368.2.10 / MA1368.2.18 MA1368.2.19 MA1368.2.2 MA1368.2.20 MA1368.2.3 MA1368.2.4 MA1368.2.5 MA1368.2.5 / MA1368.2.6 MA1368.2.6 / MA1368.2.7 MA1368.2.16 / MA1368.2.7 / MA1368.2.8 MA1368.2.9 MA1368.2.11 MA1368.2.12 MA1368.2.13 MA1368.2.14 MA1368.2.15 MA1368.2.17 MA1368.2.18 MA1368.2.19 MA1368.2.20 MA1368.3.1 MA1368.3.10 MA1368.3.11 / MA1368.3.19 MA1368.3.12 / MA1368.3.20 MA1368.3.13 MA1368.3.14 MA1368.3.15 MA1368.3.16 / MA1368.3.7 MA1368.3.17 MA1368.3.18 MA1368.3.2 MA1368.3.3 MA1368.3.4 MA1368.3.5 MA1368.3.6 MA1368.3.8 MA1368.3.9 |
| Publications: | Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. [Pubmed] Nagata T, Niyada E, Fujimoto N, Nagasaki Y, Noto K, Miyanoiri Y, Murata J, Hiratsuka K, Katahira M. Solution structures of the trihelix DNA-binding domains of the wild-type and a phosphomimetic mutant of Arabidopsis GT-1: mechanism for an increase in DNA-binding affinity through phosphorylation. Proteins 78:3033-47 (2010). [Pubmed] |
| Related annotations: | PaperBLAST |
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