Transcription Factor

						

			
Accessions: AtMYB52 (AthaMYB 1.0)

			
Names: AtMYB52, Myb domain protein 52, MYB transcription factor
Organisms: Arabidopsis thaliana
Libraries: AthaMYB 1.0 1
1 Kelemen Z., Sebastian A., Xu W., Grain D., Salsac F., Avon A., Berger N., Tran J., Dubrecq B., Lurin C., Lepiniec L., Contreras-Moreira B., Dubos C. Analysis of the DNA-Binding Activities of the Arabidopsis R2R3-MYB Transcription Factor Family by One-Hybrid Experiments in Yeast. PLoS One 10, e0141044 (2015). [Pubmed]
Uniprot: Q6R0C4
Length: 250
Pfam Domains:      5-50 Myb-like DNA-binding domain
     8-68 Myb-like DNA-binding domain
   57-100 Myb-like DNA-binding domain
   60-101 Myb-like DNA-binding domain
Sequence: 
(in bold interface residues)		   1 MMCSRGHWRPAEDEKLRELVEQFGPHNWNAIAQKLSGRSGKSCRLRWFNQLDPRINRNPF   60
  61 TEEEEERLLASHRIHGNRWSVIARFFPGRTDNAVKNHWHVIMARRGRERSKLRPRGLGHD  120
 121 GTVAATGMIGNYKDCDKERRLATTTAINFPYQFSHINHFQVLKEFLTGKIGFRNSTTPIQ  180
 181 EGAIDQTKRPMEFYNFLQVNTDSKIHELIDNSRKDEEEDVDQNNRIPNENCVPFFDFLSV  240
 241 GNSASQGLC*
Interface Residues: 5, 39, 40, 41, 42, 44, 45, 49, 50, 91, 92, 95, 96, 99, 100, 101
3D-footprint Homologues: 1w0t_A, 2kdz_A, 5eyb_B, 7xur_A, 6kks_A, 3osg_A, 1mse_C, 3zqc_A
Binding Motifs: AtMYB52_I wwmaGTTr
AtMYB52_II RSWdGTTR
Binding Sites: AAAAGTTA
ACAAGTTA
AGGTTA
AGTAGTTA
AGTGGTTA
ATTAGTTG
GCTTGTTG
GTCAGTTA
TACTGTTG
TGCGGTTG
			
Publications: Kelemen Z., Sebastian A., Xu W., Grain D., Salsac F., Avon A., Berger N., Tran J., Dubrecq B., Lurin C., Lepiniec L., Contreras-Moreira B., Dubos C. Analysis of the DNA-Binding Activities of the Arabidopsis R2R3-MYB Transcription Factor Family by One-Hybrid Experiments in Yeast. PLoS One 10, e0141044 (2015). [Pubmed]
Related annotations: PaperBLAST

	
			


			

				

				
				
				
				

			

			

		

	
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