Transcription Factor
| Accessions: | 5ego_B (3D-footprint 20231221) |
| Names: | Homeobox protein Hox-B13, HXB13_HUMAN |
| Organisms: | Homo sapiens |
| Libraries: | 3D-footprint 20231221 1 1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed] |
| Uniprot: | Q92826 |
| Length: | 63 |
| Pfam Domains: | 1-57 Homeobox domain |
| Sequence: (in bold interface residues) | 1 RKKRIPYSKGQLRELEREYAANKFITKDKRRKISAATSLSERQITIWFQNRRVKEKKVLA 60 61 KVK |
| Interface Residues: | 1, 2, 3, 4, 12, 28, 30, 42, 43, 45, 46, 49, 50, 53, 54, 57 |
| 3D-footprint Homologues: | 1fjl_B, 5zfz_A, 1ig7_A, 2h1k_B, 1puf_A, 3cmy_A, 6a8r_A, 1nk2_P, 1zq3_P, 2lkx_A, 6es3_K, 2ld5_A, 7q3o_C, 3lnq_A, 2hos_A, 4xrs_G, 1b72_A, 3rkq_B, 5flv_I, 3a01_E, 7psx_B, 5zjt_E, 4cyc_A, 1jgg_B, 2hdd_A, 2r5y_A, 6m3d_C, 1au7_A, 5jlw_D, 6vz3_A, 2xsd_C, 1le8_A, 1e3o_C, 7xrc_C, 1o4x_A, 6fqp_B, 1le8_B, 1du0_A, 6fqq_E, 5hod_A, 1mnm_C, 4qtr_D, 1puf_B, 1k61_B |
| Binding Motifs: | 5ego_B tnnTAaa 5ego_AB TGACAgnTTTAnna |
| Binding Sites: | 5ego_D 5ego_E |
| Publications: | Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed] |
| Related annotations: | PaperBLAST |
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