Transcription Factor
Accessions: | T19196 (AthalianaCistrome v4_May2016) |
Names: | AT4G33280, REM16, T19196; |
Organisms: | Arabidopsis thaliana |
Libraries: | AthalianaCistrome v4_May2016 1 1 O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed] |
Notes: | ecotype:Col-0, experiment type: DAP-seq, family:ABI3-VP1 |
Length: | 337 |
Pfam Domains: | 28-114 B3 DNA binding domain 223-315 B3 DNA binding domain |
Sequence: (in bold interface residues) | 1 MEENCEDCMKWEEELYWTHFQTLHFTQLLLPGFHNRLVIPRKFSTHCKRKLPQIVTLKSP 60 61 SGVTYNVGVEEDDEKTMAFRFGWDKFVKDHSLEENDLLVFKFHGVSEFEVLVFDGQTLCE 120 121 KPTSYFVRKCGHAEKTKASHTGYEQEEHINSDIDTASAQLPVISPTSTVRVSEGKYPLSG 180 181 FKKMRRELSNDNLDQKADVEMISAGSNKKALSLAKRAISPDGFLVFMKRSHVVSKCFLTI 240 241 PYKWCVKNMLITRQEVVMQVDQTKWEMKFNIFGARGSGGISTGWKKFVQDNNLREGDVCV 300 301 FEPANSETKPLHLNVYIFRGEETERTNNVDPVYTISE |
Interface Residues: | 272, 274, 275, 277, 280 |
3D-footprint Homologues: | 6ycq_A, 7et6_A, 5bs8_A |
Binding Motifs: | M0005 TTTaykkTTTTGGCGGGAAAA |
Related annotations: | PaperBLAST |
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.