Transcription Factor
| Accessions: | A0A060D1F1 (JASPAR 2024) |
| Names: | A0A060D1F1_MAIZE, AP2-EREBP transcription factor, Ethylene-responsive transcription factor ERF056, Fragment |
| Organisms: | Zea mays |
| Libraries: | JASPAR 2024 1 1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed] |
| Length: | 296 |
| Pfam Domains: | 119-167 AP2 domain |
| Sequence: (in bold interface residues) | 1 MAATIDLSGEELMRALEPFIRDASAHGSSPLLHPHQPLSPSSPFSFHQAVAAASSYGGNY 60 61 PFAAADEAGQLSPSQMQYIQARLHLQRRQAQTSVLGPRAQPMKASASAAPAPARPQKLYR 120 121 GVRQRHWGKWVAEIRLPRNRTRLWLGTFDTAEEAALAYDQAAYRLRGDAARLNFPDNAAS 180 181 RGPLHASVDAKLQSLCQSIAASKKGAKKPASAAAAASSSAPTSNCSSPSSDDATSSCLES 240 241 ATESSCPSPSPSASPGPTVPEMQQLDFSEAPWDEAAGFALTKYPSYEIDWDSLLAN |
| Interface Residues: | 123, 124, 125, 126, 127, 131, 133, 135, 137, 140, 142, 144 |
| 3D-footprint Homologues: | 1gcc_A, 5wx9_A, 7wq5_A, 7et4_D |
| Binding Motifs: | MA1817.1 ccGCCGCCGCCgc MA1817.2 cGCCGCCGCC |
| Binding Sites: | MA1817.2.19 MA1817.2.13 / MA1817.2.14 / MA1817.2.15 / MA1817.2.16 MA1817.1.1 / MA1817.1.2 MA1817.1.10 MA1817.1.11 MA1817.1.12 MA1817.1.13 / MA1817.1.14 / MA1817.1.15 MA1817.1.16 MA1817.1.17 MA1817.1.18 MA1817.1.19 MA1817.1.2 / MA1817.1.3 MA1817.1.20 MA1817.1.3 / MA1817.1.5 MA1817.1.11 / MA1817.1.4 MA1817.1.12 / MA1817.1.5 MA1817.1.13 / MA1817.1.6 MA1817.1.15 / MA1817.1.7 MA1817.1.17 / MA1817.1.8 MA1817.1.19 / MA1817.1.9 MA1817.2.3 MA1817.1.1 MA1817.1.10 MA1817.1.14 MA1817.1.16 MA1817.1.18 MA1817.1.20 MA1817.1.4 MA1817.1.6 MA1817.1.7 MA1817.1.8 MA1817.1.9 MA1817.2.1 MA1817.2.10 MA1817.2.11 / MA1817.2.9 MA1817.2.12 MA1817.2.17 MA1817.2.18 MA1817.2.2 MA1817.2.20 MA1817.2.4 MA1817.2.5 MA1817.2.6 MA1817.2.7 MA1817.2.8 |
| Publications: | Li S, Wang H, Li F, Chen Z, Li X, Zhu L, Wang G, Yu J, Huang D, Lang Z. The maize transcription factor EREB58 mediates the jasmonate-induced production of sesquiterpene volatiles. Plant J 84:296-308 (2015). [Pubmed] |
| Related annotations: | PaperBLAST |
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