Transcription Factor
| Accessions: | ARF16 (EEADannot 2026-03-04) |
| Names: | ZmARF16;ARFTF16;Zm00001eb207450_P001 |
| Organisms: | Zea mays |
| Libraries: | EEADannot 2026-03-04 1 1 Contreras-Moreira B, Sebastian A. FootprintDB: Analysis of Plant Cis-Regulatory Elements, Transcription Factors, and Binding Interfaces. Methods Mol Biol 1482:259-77 (2016) [Pubmed] |
| Notes: | family:B3 ARF |
| Length: | 847 |
| Pfam Domains: | 67-168 B3 DNA binding domain 193-276 Auxin response factor 708-803 AUX/IAA family |
| Sequence: (in bold interface residues) | 1 MEAQIPNYPSLPPQLICQLHNVTMHADAETDEVYAQMTLQPLSPQELKDPFLPAELGTAS 60 61 NQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFNQQPPAQELIAKDLHGNDWKFR 120 121 HIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNDNNQLLLGIRRANRPQTVMPSSVL 180 181 SSDSMHIGLLAAAAHAASTNSRFTIFYNPRASPCEFVIPMAKYVKAVYHTRISVGMRFRM 240 241 LFETEESSVRRYMGTITGISDLDPVRWPNSHWRSVKVGWDESTAGEKQPRVSLWEIEPLT 300 301 TFPMYPSPFALGLKRPWPAGLPSLYGGRGDGLTSSLMWLRDRANPGFQSLNFSGLGMSPW 360 361 MQPRLDNSLLGLQSDMYQTIAAAAALQSTTKQVPPSAMQFQQPQNIADRSALLSSQILQQ 420 421 VQPRFQQIYPQNLNENKIQGHTQPEYLQVQQQLQRCQSFNEQKPPMHPQQQQQEPQQQQC 480 481 VQTPQDQQMQEQKHLHNFHSLPDALSAFSQLSPATHSPPSALQTVPAFSHQQNFPDTNIS 540 541 SLSPSTGPSMHGMLGRLPSEAASSLPCVAMNAPVSVSDPWSSKRVAVESVNPCRPHVSPH 600 601 IEHLDMATCNMPQSSALAPLPGRECLVDEDGCSDPQNHLLFGVHIDSHSLLMQGGIPALQ 660 661 NDNSSGTIPYSTSNFLSPSENDFPLNQPLRSAGCLDESDYLPCAENAEQANQQFATFVKV 720 721 YKSGTVGRLLDITRFSSYDELRSEVGRLFGLEGQLEDPLRSGWQLVFVDREDDVLLVGDD 780 781 PWQEFVNSVSCIKILSPEEVQRMGKPGIQLLSSAPSRRLGNGCDSYASMQEPRGLDAGMA 840 841 PVGSVEF |
| Interface Residues: | 72, 74, 79, 80, 81, 83, 122, 124, 125, 126, 127, 128, 129, 130 |
| 3D-footprint Homologues: | 6j9b_A, 6ycq_A, 7et6_A, 6fas_B, 8oj2_A |
| Binding Motifs: | EEAD0183 rvCmGACArsa EEAD0184 sdysyTGTCGG |
| Related annotations: | PaperBLAST |
Disclaimer and license
These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.