Transcription Factor
| Accessions: | 4y60_C (3D-footprint 20231221) |
| Names: | SOX18_MOUSE, Transcription factor SOX-18 |
| Organisms: | Mus musculus |
| Libraries: | 3D-footprint 20231221 1 1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed] |
| Uniprot: | P43680 |
| Length: | 76 |
| Pfam Domains: | 4-72 HMG (high mobility group) box 5-65 Domain of unknown function (DUF1898) |
| Sequence: (in bold interface residues) | 1 GLRIRRPMNAFMVWAKDERKRLAQQNPDLHNAVLSKMLGKAWKELNTAEKRPFVEEAERL 60 61 RVQHLRDHPNYKYRPR |
| Interface Residues: | 6, 9, 11, 12, 15, 19, 30, 31, 32, 35, 73 |
| 3D-footprint Homologues: | 3u2b_C, 1o4x_B, 7m5w_A, 3f27_D, 4s2q_D, 1qrv_A, 3tmm_A, 4y60_C, 2gzk_A, 1j5n_A, 6jrp_D, 2lef_A, 1hry_A, 3tq6_B |
| Binding Motifs: | 4y60_C ACAATg |
| Binding Sites: | 4y60_A 4y60_B |
| Publications: | Klaus M, Prokoph N, Girbig M, Wang X, Huang YH, Srivastava Y, Hou L, Narasimhan K, Kolatkar PR, Francois M, Jauch R. Structure and decoy-mediated inhibition of the SOX18/Prox1-DNA interaction. Nucleic Acids Res 44:3922-35 (2016). [Pubmed] |
| Related annotations: | PaperBLAST |
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