Transcription Factor

						

			
Accessions: I1RK94 (JASPAR 2024)

			
Names: I1RK94_GIBZE
Organisms: Gibberella zeae
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Uniprot: I1RK94
Length: 618
Pfam Domains:   487-510 C2H2-type zinc finger
  541-571 C2H2-type zinc finger
  579-603 Zinc finger, C2H2 type
  579-603 C2H2-type zinc finger
Sequence: 
(in bold interface residues)		   1 MLSIPRLHQQQLQLQRQLQNNSSNIHQQYPFAHNCHAEYNAASYSDIPRSNYDDEIAALS   60
  61 QQLPTNLMQNEAWGLPQQAPRQSRAHQRESSLSSLGSSTAGPTSPFSHQLPHPYIAITDT  120
 121 NDQSNSSSHYQLAKTMPSYQTYQSCDGIEHSAMPEMAYPITLPGPSGKPRMDSRLMQAPE  180
 181 FCNSSTRSHPASVASSIAGDSPATPTVGETDVTERRRKGSNLYCESIVNMDSHSTLLGFP  240
 241 NAPKLDRTMTDAYVDELYSPNFAVTSTPPSQSQISVSPTNDLFSQRLTAANKQHLSAAHS  300
 301 PASSTSRDRSPFRTGSPHALSPAHDFGNHNLNQSLPFNSAQRMREQTKAQQDAQFIQQQM  360
 361 NMKQEPETPKTISPKDAILEFNESEGDNNFPLFPQDSSFGMDQFPKSMMSSQESIPETHI  420
 421 QNHFNFLPPHGAPGITVPQQYPFIAHPTRISHDTPPRLSSTGSSSNGSRNATPATRPTNT  480
 481 AADGGTYTCTYHGCTLRFDTPAQLQKHKREGHRQTQTMGPARPREIGMTSALVNTQAGPH  540
 541 RCDRINPSTGKPCSTVFSRPYDLTRHEDTIHNARKQKVRCDLCTEEKTFSRADALTRHYR  600
 601 VCHPDMELPGKHRRRAGA
Interface Residues: 317, 336, 337, 382, 384, 470, 471, 472, 475, 476, 499, 500, 501, 502, 503, 505, 506, 508, 509, 510, 528, 530, 531, 534, 559, 560, 561, 562, 564, 565, 591, 592, 593, 594, 597
3D-footprint Homologues: 5uc6_A, 2gli_A, 1tf3_A, 1tf6_A, 6blw_A, 5kl3_A, 2jpa_A, 5v3j_F, 1f2i_J, 6u9q_A, 2drp_D, 1mey_C
Binding Motifs: UN0103.1 tyGCCACc
UN0103.2 tyGCCAC
			
Related annotations: PaperBLAST

	
			


			

				

				
				
				
				

			

			

		

	
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.