Transcription Factor

Accessions: Q8K4J2 (JASPAR 2024)
Names: COE4_MOUSE, Early B-cell factor 4, EBF-4, O/E-4, OE-4, Olf-1/EBF-like 4, Transcription factor COE4
Organisms: Mus musculus
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Uniprot: Q8K4J2
Length: 599
Pfam Domains: 256-338 IPT/TIG domain
Sequence:
(in bold interface residues)
1 MFPAQDALPRGGLHLKEEPLLPSSLGSVRSWMQSAGILDSNTAAQSGVGLARAHFEKQPP 60
61 SNLRKSNFFHFVLAMYDRQGQPVEVERTAFIDFVEKDREPGTEKTNNGIHYRLRLVYNNG 120
121 LRTEQDLYVRLIDSMSKQAIIYEGQDKNPEMCRVLLTHEIMCSRCCDRKSCGNRNETPSD 180
181 PVIIDRFFLKFFLKCNQNCLKNAGNPRDMRRFQVVVSTTVSVDGHVLAVSDNMFVHNNSK 240
241 HGRRARRLDPSEAATPCIKAISPGEGWTTGGATVIIIGDNFFDGLQVVFGNVLLWSELIT 300
301 PHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGAPGRFVYTALNEPTIDYGFQRLQKVIPRH 360
361 PGDPERLPKEVLLKRAADLAEALYGVPSSNQELLLKRAADVAEALYSAPRAPAPLGPLAP 420
421 SHPHPAVVGINAFSSPLAIAVGDTTPEPGYARSCGSASPRFAPSPGSQQSSYGSGLGAGL 480
481 GSYGAPGVTGLGVPGSPSFLNGSTATSPFAIMPSSPPLAAASSMSLPAAAPTTSVFSFSP 540
541 VNMICAVKQRSAFAPVLRPPSSPSQACPRAHREGLPDQPFEDTDKFHSAARGLQGLAYS
Interface Residues: 64, 66, 67, 164, 173, 203, 205, 237, 238, 239, 240
3D-footprint Homologues: 3mln_A, 3mlp_F
Binding Motifs: UN0672.1 rrTCCCCAGGGGAcy
MA2122.1 TCCCCAGGGGA
Binding Sites: UN0672.1.1
UN0672.1.10
UN0672.1.11
UN0672.1.12
UN0672.1.13
UN0672.1.14
UN0672.1.15
UN0672.1.16
UN0672.1.17
UN0672.1.18
UN0672.1.19
UN0672.1.2
UN0672.1.20
UN0672.1.3
UN0672.1.4
UN0672.1.5
UN0672.1.6
UN0672.1.7
UN0672.1.8
UN0672.1.9
MA2122.1.5
MA2122.1.7
MA2122.1.1
MA2122.1.10
MA2122.1.11
MA2122.1.12 / MA2122.1.20
MA2122.1.13
MA2122.1.14
MA2122.1.15 / MA2122.1.19
MA2122.1.16
MA2122.1.17
MA2122.1.18
MA2122.1.2
MA2122.1.3
MA2122.1.4 / MA2122.1.9
MA2122.1.6
MA2122.1.8
Publications: Kubo S, Kataria R, Yao Y, Gabrielski JQ, Zheng L, Markowitz TE, Chan W, Song J, Boddapati AK, Saeki K, Haupl B, Park AY, Cheng YH, Cui J, Oellerich T, Lenardo MJ. Early B cell factor 4 modulates FAS-mediated apoptosis and promotes cytotoxic function in human immune cells. Proc Natl Acad Sci U S A : (2022). [Pubmed]
Related annotations: PaperBLAST

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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.