Transcription Factor

Accessions: 4rb3_D (3D-footprint 20231221)
Names: DNA-binding transcriptional dual regulator of siderophore biosynthesis and transport(Fur family), V6F4Q0_MAGGM
Organisms: Magnetospirillum gryphiswaldense, strain DSM 6361 / JCM 21280 / NBRC 15271 / MSR-1
Libraries: 3D-footprint 20231221 1
1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed]
Uniprot: V6F4Q0
Length: 133
Pfam Domains: 11-129 Ferric uptake regulator family
Sequence:
(in bold interface residues)
1 VSRIEQRLIDKGLKVTDQRRVIAQVLSDSADHPDVEEVYRRATAKDPRISIATVYRTVRL 60
61 FEEESILERHDFGDGRARYEEAPSEHHDHLIDVNSARVIEFTSPEIEALQREIARKHGFR 120
121 LVGHRLELYGVPL
Interface Residues: 14, 36, 50, 51, 52, 53, 55, 56, 59, 60, 63, 71, 77
3D-footprint Homologues: 7vo0_N, 7vpz_N, 4rb3_D, 7x74_H, 6jgx_B, 1k82_A
Binding Motifs: 4rb3_CD TGCAAAnnnTTTGCAnnnA
4rb3_D TnnnTGCAAA
Binding Sites: 4rb3_A
4rb3_B
Publications: Deng Z, Wang Q, Liu Z, Zhang M, Machado AC, Chiu TP, Feng C, Zhang Q, Yu L, Qi L, Zheng J, Wang X, Huo X, Qi X, Li X, Wu W, Rohs R, Li Y, Chen Z. Mechanistic insights into metal ion activation and operator recognition by the ferric uptake regulator. Nat Commun : (2015). [Pubmed]
Related annotations: PaperBLAST

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