Transcription Factor
| Accessions: | CmWIP1 (EEADannot 2023-12-22) |
| Names: | ACX85637 |
| Organisms: | Cucumis melo |
| Libraries: | EEADannot 2023-12-22 1 1 Contreras-Moreira B, Sebastian A. FootprintDB: Analysis of Plant Cis-Regulatory Elements, Transcription Factors, and Binding Interfaces. Methods Mol Biol 1482:259-77 (2016) [Pubmed] |
| Notes: | family:WIP |
| Length: | 353 |
| Pfam Domains: | 261-284 Zinc-finger double domain |
| Sequence: (in bold interface residues) | 1 MGDPNLSINNNNNTCFSLSPFQHYSSSSSSSSSSYNSHYHHDHLFSLSYSNDNNSNTLKN 60 61 NMTTSHYNPSSSSQVLLPLLSLSPARVEQDHHHHHHQNIIDHDHNIIDYDQNDVTVALHL 120 121 GLPTPSSSSNNNSDLILRLSSTEISDQEDHTHQLQELSSNNSIASNSSGVNKGQYWIPTP 180 181 TQILIGPTQFSCPLCFKTFNRYNNMQMHMWGHGSQYRKGPQSLRGTQPTAMLRLPCYCCA 240 241 IGCRNNIDHPRSKPLKDFRTLQTHYKRKHGMKPFTCRKCGKAFAVRGDWRTHEKNCGKLW 300 301 HCTCGSDFKHKRSLKDHIKAFGLGHAAYGIDDHHNHHHSFDNEDDDPASDIET |
| Interface Residues: | 190, 200, 201, 202, 203, 204, 207, 210, 222, 229, 230, 231, 233, 243, 244, 245, 246, 247, 248, 249, 252, 256, 257, 258, 259, 260, 261, 262, 263, 284, 285, 286, 287, 288, 289, 291, 292, 310, 311, 312, 313, 314, 316, 317 |
| 3D-footprint Homologues: | 2kmk_A, 6ml4_A, 2drp_D, 5v3j_F, 4x9j_A, 8ssq_A, 7w1m_H, 6wmi_A, 2i13_A, 7y3l_A, 5ei9_F, 5yel_A, 8gn3_A, 6e94_A, 1g2f_F, 5kl3_A, 6blw_A, 2wbs_A, 1llm_D, 1mey_C, 2jpa_A, 8cuc_F, 1ubd_C, 7y3m_I, 7txc_E, 5yj3_D, 8h9h_G, 7eyi_G |
| Binding Motifs: | EEAD0073 wwACCTTGAttww |
| Related annotations: | PaperBLAST |
Disclaimer and license
These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.