Transcription Factor
| Accessions: | T005317_1.02 (CISBP 1.02) |
| Names: | NCU07587, T005317_1.02; |
| Organisms: | Neurospora crassa |
| Libraries: | CISBP 1.02 1 1 Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. [Pubmed] |
| Notes: | experiment type:PBM, family:APSES |
| Length: | 822 |
| Pfam Domains: | 68-132 KilA-N domain 398-438 Ankyrin repeats (many copies) 399-423 Ankyrin repeat 537-567 Ankyrin repeat 537-563 Ankyrin repeat |
| Sequence: (in bold interface residues) | 1 MQPPQLGGASQQSQPSSQQSFSMSQSSQSVYRQYTDPPNRLHNDHAVPTIYSATYSGVGV 60 61 YEMEVNNVAVMRRQKDGWVNATQILKVANIDKGRRTKILEKEIQIGEHEKVQGGYGKYQG 120 121 TWIPFERGLEVCRQYGVEELLSKLLTHNRGQEGETGNVDTPTKEQAMAAQRKRMYNASSQ 180 181 ENRGIGSTGTFFKNISSTASTAVAAISKARFDSPAPRNRSGPSRAPSFNRQSSMQDVADF 240 241 PNSQQSLVSTEYATQTQNADSGFGSQTTQPLAGDGLEQPPRKRQRVLTPARSFGGQTPGH 300 301 QPLDPFNAGNIANGDSGSPTEPSNSFNYDQVTANDGDASYALGPLRPLPYENNADAEAKR 360 361 GMLMGLFMDANGPEEAIQAALCNVSPQELDSPIDTQSHTALHWAATLSRMPLLRALIHAG 420 421 ANPWRVNACGETALMRACTVTNSMENNTFPELLDLLGCTLDVTDDKGRTVLHHIAVTSAV 480 481 KGRHYASRYYLESLLEWVVRQGSAPSSQENGIGDRKGRRMGIARFMSEIVNAQDNSGDTA 540 541 LNVAARVGNRSIISQLLEVGADPTIPNRANLKPLDFGIGIADAETNDDPAQEKTGATTGS 600 601 GHKSRETSDEVVRSITHLIGESASIFQNELKKKQESIDTLHSQLRVTSSQVGDARRTLES 660 661 LQEKLKAQQLAKQKIVNFNRACEEEEQILIELEQRHGRLDVASANAWEMELESALEIVKT 720 721 QSPKGLDPDSRPSLPSAAVLRARIKALRARSSKTRQAVAALQAQSKEKELKYRRLVSLCT 780 781 RRPEIEVEALLDTLTRAVESEKPELEIARVRRFLGGVEGVVH |
| Interface Residues: | 92, 93, 112, 115, 119 |
| 3D-footprint Homologues: | 4ux5_A |
| Binding Motifs: | M0090_1.02 dwkaCrCGw |
| Related annotations: | PaperBLAST |
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.