Transcription Factor

						

			
Accessions: T008634_1.02 (CISBP 1.02)

			
Names: CADATEAP00000246, T008634_1.02;
Organisms: Aspergillus terreus
Libraries: CISBP 1.02 1
1 Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. [Pubmed]
Notes: experiment type:PBM, family:AT hook
Length: 578
Pfam Domains:      9-20 AT hook motif
Sequence: 
(in bold interface residues)		   1 MSPLNSTSTRKRGRPPKYQSAEERQAAKITRQRNQRQAAQAAKRNTFFDEYYSAGPSATG   60
  61 ERPIALVPGIAALSVTHELEELLPPLSPDPAPLELEDSSILIDEPPLELNSLEPAASPTP  120
 121 NLPEQSRPTHSEHLEGDLSNLETGSPAPAAAEDGEDVCTLARVLADQLYQHHGCCRECHE  180
 181 QACAAHQETHSVHTGLGEYVDQINIAGDFPDVLGSATIAARESNLAQQVTKARKQQIYCG  240
 241 IDPHKPDESPTHLCVAADHRPDPSLGVTVDIDSVGGFVSSLAVARRGIRWHPTQMAVSDL  300
 301 QSSLHIDPVSVQYFDSTGQAHHVRRPVHQVPHYTFGRLIGFEDLSLYLLFPRLYREDQQS  360
 361 SRLLDQDFQQWTDEILLPIINRCYSGDLIQHYPSSFDHSRLNATARGVEMRSQRVDPIPR  420
 421 EQLLAYFLPPEALPTIWEQILEATHRPGFHQFQDLKILIEGKNLKTLTKADTLADLMAGF  480
 481 QQHWQNAINEDYLAEPFFYDLGKETCPTTASERERPPQSLLWRRCCLNAYSQWIHSKQPA  540
 541 DAPHALQHFYPISMLEDTGSLTLETPANITAAAGRSLL
Interface Residues: 4, 14, 15
3D-footprint Homologues: 4m6f_A
Binding Motifs: M0123_1.02 garkmmwwwW
			
Related annotations: PaperBLAST

	
			


			

				

				
				
				
				

			

			

		

	
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