Transcription Factor

						

			
Accessions: T137867_1.02 (CISBP 1.02)

			
Names: ceh-26, T137867_1.02;
Organisms: Caenorhabditis elegans
Libraries: CISBP 1.02 1
1 Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. [Pubmed]
Notes: experiment type:PBM, family:Prospero
Length: 586
Pfam Domains:   426-585 Homeobox prospero-like protein (PROX1)
Sequence: 
(in bold interface residues)		   1 MSSGLPSIAATAQPSANGFSFNNGFPPFGIYYSQLPPVNSNGSTPNSSNRFKVKRHRQRV   60
  61 DAGEPRNTYQGASTSVSSNSSSSSSTSNTNSTPSSSSTSSKKSTEGMTETETMTASIEQE  120
 121 KVIQNEESEAGKDGMEEHDDGMNDFEIIDDTNDEVEESEERESPESNSTLLQKGKAFNHR  180
 181 KLERKTEQINVTVGGTEEAEETTDEAEGRELSALQAQLQNGHIAEQQRRFYAAFLDQQRK  240
 241 QVAAAQILHNGKINIERLVSSVKGDLVTNFMKDLEKVIRDWAADEVLKQEAAAPPQIPQP  300
 301 PPQFHPIFPANPLFHMAPPHHPVAGGGIFPPNFNAFNAFNALRRNLQDVDTSSEMKKKRT  360
 361 KVEIKKEDAMSSRASPLSASASPPLSRFFPAPTMVGHYGGMNFGDREDSPTNSDELSECG  420
 421 YEGGGSSSMLTPMHLRKAKLMFFYTRYPNSNLLKSYFPDIRFNKNNTAQLVKWFSNFREF  480
 481 YYNQMEKFARQALAEGITDRNDIFVSKDSELFKVLNTHYNRNNHIKAPDRLVFVVQETLR  540
 541 EFHDAIKQGKDIEPSWKKTIYKVINRLEDQIPDFFKEPNFLERLET
Interface Residues: 472, 476, 479
3D-footprint Homologues: 1xpx_A
Binding Motifs: M1514_1.02 yyyaAgrhrt
			
Related annotations: PaperBLAST

	
			


			

				

				
				
				
				

			

			

		

	
Disclaimer and license


These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.