Transcription Factor

						

			
Accessions: T082665_1.02 (CISBP 1.02)

			
Names: slp2, T082665_1.02;
Organisms: Drosophila melanogaster
Libraries: CISBP 1.02 1
1 Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. [Pubmed]
Notes: experiment type:B1H, family:Forkhead
Length: 451
Pfam Domains:   180-275 Fork head domain
Sequence: 
(in bold interface residues)		   1 MVKIEEGLPSSEISAHSLHFQHHHHPLPPTTHHSALQSPHPVGLNLTNLMKMARTPHLKS   60
  61 SFSINSILPETVEHHDEDEEEDVEKKSPAKFPPNHNNNNLNTTNWGSPEDHEAESDPESD  120
 121 LDVTSMSPAPVANPNESDPDEVDEEFVEEDIECDGETTDGDAENKSNDGKPVKDKKGNEK  180
 181 PPYSYNALIMMAIRQSSEKRLTLNGIYEYIMTNHPYYRDNKQGWQNSIRHNLSLNKCFVK  240
 241 VPRHYDDPGKGNYWMLDPSAEDVFIGGSTGKLRRRTTAASRSRLAAFKRSLIGPMFPGLA  300
 301 AYPQFGQFLTYPPTAPSLLASMYQRYNPFAPKGGPGHPGLPPGLPGLPGPPGPQGPPGPP  360
 361 PPPFVAPPTSSELYQRLQYQQLLHQHAAAAALAAHQRQLSVAAASAASQPPPTHHHPHLA  420
 421 VGQAPLSPGGDSPGPSPQPLHKPVTVVSRNS
Interface Residues: 220, 223, 225, 226, 227, 229, 230, 231, 233, 234, 243, 250, 273, 275, 276
3D-footprint Homologues: 3l2c_A, 7vox_H, 2hdc_A, 3g73_A, 6ako_C, 7yzg_A, 7tdw_A, 7yz7_A, 6el8_A, 2uzk_A, 7tdx_A, 2a07_J, 7yzb_A, 6nce_A, 3co6_C, 7vou_C, 2c6y_A, 7yze_A, 7cby_C, 3qrf_G, 6a8r_A
Binding Motifs: M5199_1.02 rTAAACAa
			
Related annotations: PaperBLAST

	
			


			

				

				
				
				
				

			

			

		

	
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