Transcription Factor
| Accessions: | T002156_1.02 (CISBP 1.02) |
| Names: | PFF0200c, T002156_1.02; |
| Organisms: | Plasmodium falciparum |
| Libraries: | CISBP 1.02 1 1 Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. [Pubmed] |
| Notes: | experiment type:PBM, family:AP2 |
| Length: | 1979 |
| Pfam Domains: | 266-306 AP2 domain |
| Sequence: (in bold interface residues) | 1 MEDNLVKESNEIIGSCTVDGVHSSIMQKNMCSSDIILDDTNSKSLCDSNKLKKDNEKGID 60 61 ENIKETSTCTYTVDENVMKSNEEKNDEDDDGSNNVDVVGDNIGNLPNENMDNRNNNDNNN 120 121 INNNIQYDNVNNNNNINNNDSGGYSHSNDILNSNINQIVPFVNNANNEEQNKMREHIGSQ 180 181 EPVILIDKIERCLVVEWYENNIRREQRISYKKYGNDKAKLRAKELIEKLKSGITFEQLYP 240 241 DKGPPIVRVFENVGVYNVSLIRDRIEREWRVEWLENGVPMKARWSCKKVGNDEAQKRADT 300 301 FAQSMIKGIFNPILLHKATGTRFSRSDKSVVKINVYMNKNIKCLTNGIEDDLNTDHHHHH 360 361 HNNNNNNCVKTFSIKGEVPSSTLNHKVTRSYRRRKKKNDINNTMEIQDGNVRSMTYLVNN 420 421 NSSYLNHSNNMNPNLCNMNLMDYQMNEMYQGNNMSNMMLLDNNMKNMIHHNNVNNDLLLN 480 481 SDLYNDKKRTRSSRTTRKRNICKTEKSMITKNGNKYMINNDKNIQMNKNDILVNTYLVKN 540 541 ELCNNYQNEPNNNNNNNNNNIMMMMNNNKKKVKTQLNNNIKNSYYIPSEQYEMFCSANNI 600 601 VSGNRNKRANKSAYKITKNNKNNDFVNYNNISNTIPDNVTDEVQNYQYMLNDNMNGEYLN 660 661 LNEYPMRNTEDGVDNYYQNKNYYYLYNNNNGMLVKTYVVDQEGNHNLVKNNNFVKIENTD 720 721 YLYGGTSTNKCQPIADKRINNNYDSSSNKYKQNMLEYNNNYNLNVDKKGMNFTGSVSSLD 780 781 AKKKKRKNSRSSKNRNTLETPYDNYTINYNVTCTKDKRGKNKKDTCENINDNIYENRNND 840 841 ENLVGAKRRTKRVIATRKKKNARGKYKNNDNEDNNDIDGNEKNIGNEKDKENYEEKIEQG 900 901 YIKEEYIVHGCEEEVKGLEENKGRKRRRIKSSKFYDNDEYIYSLDKTYNKKKASQYNNNN 960 961 NDNNNDNNDNNNNNNNDNNNYGNTMVQNEFNRYFMNNNNYMVMNNMHTNNMLNNEGHYLN 1020 1021 NNIYCKNEMQNVSFNNISRENMNMMNIPNMVNMNNLTNINSAYNVKTIENYNNGDKMNNP 1080 1081 SFVNNCIEFVENPRGYRVPYEYQSQRFYEYFEVPLNSRKEFEMQQKYFANLFSLHILAVG 1140 1141 WNVNKGDGMENNNIPQLTDQNMIPNGNNNNNNNTYELVPYNEKENIMNNKELLSSKEQIN 1200 1201 GPYIPYNYKPIYHVEPFSSDVNNNMNSNCNYYIDLENMNSTKIDGKEYTYNEVQTMNNYR 1260 1261 AINKKESLENVANYENMMNYDNISNYNNPDDVINQRSNVANISDHNNNLNNISAVNDVHN 1320 1321 IIDKNNMNHIPYYNDMNNNITNYANMTGIQNLNNMNPIMIDPNNNADSVEEFYDAIDGCN 1380 1381 VVDTNYMVGTNNMIDQIHFNDVTSNVGNMNNNLTNFSNPYNSVKVINDLNNTGEMNNNMI 1440 1441 HLNNKNEMTGLGNMNDNVHINNASVIKENGNSNSSKEMNHMNMEKLYVSQMNYSTNDLIH 1500 1501 MNNNNNKNNNNNKNNNNNNNNNNNSNVNVVGIENSVNSTVYDNMNNYIPMNTINVNYMND 1560 1561 SRSDLMNGKNNINVEYKNVRGYDETLSNRSDMISYNMSGLDHFNDNRYRNDMDPLGKTNI 1620 1621 LNNHNNIGSVNIYNNQTDLINNYFNNNNNNNNNKYANINSSDMYKEQYYNTHMNHLINDN 1680 1681 KEISNNFDDSKKNVKGITNGDNKDLLNVHNNANIKINNTCNINDTSNMLQENNIATNKKD 1740 1741 LQVINKNMVLTYTCNNDDMINSLNGVNDLSNDPNDGSLKENRKNEPSFINTNVNVNVNNT 1800 1801 NKNKVNGDNDIESNTLLGEDNNKINEKTIHSNSIYKNCNGSSDDANVPYENSDHLYFMEK 1860 1861 EKYASDNVVNRNAHNQFKDSYYNLLSNEDVNNNITNENNNNSDDMSCNQYMKKNNNTSNK 1920 1921 IIKEMNNYDFYSNKKMIDKLRSTSNSSTINTEYLPSNLLNSISINNVSQSNQINEHVDK |
| Interface Residues: | 510, 512, 515, 516, 1299 |
| 3D-footprint Homologues: | 7uy7_E, 7z9c_C, 8qqi_C |
| Binding Motifs: | M0071_1.02 gyGCACCc |
| Related annotations: | PaperBLAST |
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