Transcription Factor
| Accessions: | UP00279A (UniPROBE 20160601) |
| Names: | Chromatin structure remodeling complex protein RSC30, Remodel the structure of chromatin complex subunit 30, Rsc30, YHR056C |
| Organisms: | Saccharomyces cerevisiae |
| Libraries: | UniPROBE 20160601 1 1 Hume MA, Barrera LA, Gisselbrecht SS, Bulyk ML. UniPROBE, update 2015: new tools and content for the online database of protein-binding microarray data on protein-DNA interactions. Nucleic Acids Res : (2015). [Pubmed] |
| Uniprot: | P38781 |
| Description: | One of 15 subunits of the 'Remodel the Structure of Chromatin' (RSC) complex; non-essential gene required for regulation of ribosomal protein genes and the cell wall/stress response; highly similar... |
| Length: | 101 |
| Pfam Domains: | 13-45 Fungal Zn(2)-Cys(6) binuclear cluster domain |
| Sequence: (in bold interface residues) | 1 MDMQVRKVRKPPACTQCRKRKIGCDRAKPICGNCVKYNKPDCFYPDGPGKMVAVPSASGM 60 61 STHGNGQGSNHFSQGNGVNQKNVMIQTQYPIMQTSIEAFNF |
| Interface Residues: | 20, 21, 22, 50, 52, 53 |
| 3D-footprint Homologues: | 2er8_C, 1hwt_C, 1pyi_A, 1zme_D, 7uik_T, 1d66_B, 3coq_A, 6gys_C |
| Binding Motifs: | UP00279A_1 msmvmCgCGCGCGsGgkmsrm |
| Binding Sites: | AACGCGCG ACGCGCGC ACGCGCGT AGCGCGCG AGGCGCGC ATCGCGCG CACGCGCG CCCGCGCG CCGCGCGC CCGCGCGG CGCGCGCA CGCGCGCC CGCGCGCG CGCGCGGA CGCGCGGC CGCGCGTA CGGCGCGC GCGCGCAC GCGCGCGA GCGCGCGC |
| Publications: | *Zhu C, *Byers K, *McCord RP, Shi Z, Berger MF, Newburger D, Saulrieta K, Smith Z, Shah M, Radhakrishnan M, Philippakis AA, Hu Y, De Masi F, Pacek M, Rolfs A , Murthy TVS, LaBaer J, Bulyk ML. High-Resolution DNA Binding Specificity Analysis of Yeast Transcription Factors. Genome Research. Epub January 21, 2009, doi:10.1101/gr.090233.108 (*co-1st authors). [Pubmed] |
| Related annotations: | PaperBLAST |
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