Transcription Factor

						

			
Accessions: T057702_1.02 (CISBP 1.02)

			
Names: ken, T057702_1.02;
Organisms: Drosophila melanogaster
Libraries: CISBP 1.02 1
1 Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. [Pubmed]
Notes: experiment type:B1H, family:C2H2 ZF
Length: 601
Pfam Domains:    29-118 BTB/POZ domain
  500-522 Zinc finger, C2H2 type
  500-522 C2H2-type zinc finger
  514-538 Zinc-finger double domain
  528-551 C2H2-type zinc finger
  567-590 C2H2-type zinc finger
Sequence: 
(in bold interface residues)		   1 MKEFQRMLMLQYSKHGECILKEIGAAFRGEHPADLTIVCENKVKLHAHKLVLAAASPLIR   60
  61 NLLEDTHLSDCSTTVYFPDVNATYFKFLLDFLYSGQTCITSRDVNYLHDLLLLLQIKSDS  120
 121 WKTTDSAYLSSKCGGLRDRADRRKQQYTSPQNLEPDQTLKYEVDSVDESRNAADFSSAFN  180
 181 SNDNCESAAECERSGGHNNKEEDEDDCTHKDNKSDKDTDEIVNLSNAPPSGTSGSNSNIS  240
 241 TSSNHQQQQHHHHHHHNHNNNNNNNNNNSSSSTINPVNLSLDLRTKSENSASRTLGSGSD  300
 301 HSGIDLAVTASESTKRKGLFFDSHKDVMKPLSDGSDINSSPENYVVTPHRKRRPGFHNTQ  360
 361 SDNQPFTSYPHSLLEELRLAKSTTSPISGFGSEKNMLAHLEDGALNGDTLTPDRKHLLEA  420
 421 QRNRAQSPEIPMHLGPQFVYQWQSNQNAAMSAMPNLQSRLSSLSHISLNLDHPEGRSGSA  480
 481 SGSGANLAGSNTHASSVREYRCEYCGKQFGMSWNLKTHLRVHTGEKPFACRLCVAMFKQK  540
 541 AHLLKHLCSVHRNVITTTNGADTENRYSCCFCSMCFESVQELVRHLSGHHNNLLLTKNLR  600
 601 E
Interface Residues: 462, 464, 465, 467, 468, 470, 471, 474, 483, 485, 486, 489, 510, 511, 512, 513, 514, 516, 517, 518, 538, 539, 540, 541, 542, 543, 544, 545, 546, 578, 579, 580, 581, 582, 583, 584, 587
3D-footprint Homologues: 6blw_A, 2jpa_A, 3uk3_C, 8cuc_F, 2kmk_A, 1tf3_A, 7y3l_A, 5ei9_F, 1mey_C, 6jnm_A, 5und_A, 2drp_D, 1f2i_J, 6a57_A, 5k5i_A, 8ssu_A, 6ml4_A, 2gli_A, 8gn3_A, 1g2f_F, 7n5w_A, 5kkq_D, 1tf6_A, 6u9q_A, 4x9j_A, 2i13_A, 8h9h_G, 1llm_D, 7txc_E, 5kl3_A, 2wbs_A, 1ubd_C, 7ysf_A, 6wmi_A, 4m9v_C, 7w1m_H, 7eyi_G, 2lt7_A, 7y3m_I, 6e94_A, 8ssq_A, 5v3j_F, 5yel_A, 5yj3_D
Binding Motifs: M5052_1.02 rGwGAAAGT
			
Related annotations: PaperBLAST

	
			


			

				

				
				
				
				

			

			

		

	
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.