Transcription Factor

						

			
Accessions: T116927_1.02 (CISBP 1.02)

			
Names: APRR2, T116927_1.02;
Organisms: Arabidopsis thaliana
Libraries: CISBP 1.02 1
1 Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. [Pubmed]
Notes: experiment type:PBM, family:Myb/SANT
Length: 487
Pfam Domains:    39-133 Response regulator receiver domain
  299-348 Myb-like DNA-binding domain
Sequence: 
(in bold interface residues)		   1 MVITANDLSKWENFPKGLKVLLLLNGCDSDGDGSSAAETRSELESMDYIVTTFTDETEAL   60
  61 SAVVKNPESFHIAIVEVNMSAESESFKFLEAAKDVLPTIMISTDHCITTTMKCIALGAVE  120
 121 FLQKPLSPEKLKNIWQHVVHKAFNDGGSNVSISLKPVKESVVSMLHLETDMTIEEKDPAP  180
 181 STPQLKQDSRLLDGDCQENINFSMENVNSSTEKDNMEDHQDIGESKSVDTTNRKLDDDKV  240
 241 VVKEERGDSEKEEEGETGDLISEKTDSVDIHKKEDETKPINKSSGIKNVSGNKTSRKKVD  300
 301 WTPELHKKFVQAVEQLGVDQAIPSRILELMKVGTLTRHNVASHLQKFRQHRKNILPKDDH  360
 361 NHRWIQSRENHRPNQRNYNVFQQQHRPVMAYPVWGLPGVYPPGAIPPLWPPPLQSIGQPP  420
 421 PWHWKPPYPTVSGNAWGCPVGPPVTGSYITPSNTTAGGFQYPNGAETGFKIMPASQPVSV  480
 481 NNSLFSF
Interface Residues: 298, 337, 338, 341, 342, 345, 346
3D-footprint Homologues: 6j5b_C, 6qec_A, 7d3t_D, 8xas_E
Binding Motifs: M1332_1.02 rcrwaATCya
			
Related annotations: PaperBLAST

	
			


			

				

				
				
				
				

			

			

		

	
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