Transcription Factor

						

			
Accessions: T110380_1.02 (CISBP 1.02)

			
Names: T07C12.11, T110380_1.02;
Organisms: Caenorhabditis elegans
Libraries: CISBP 1.02 1
1 Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. [Pubmed]
Notes: experiment type:PBM, family:MADF
Length: 329
Pfam Domains:    22-106 Alcohol dehydrogenase transcription factor Myb/SANT-like
Sequence: 
(in bold interface residues)		   1 MNDLRADSPNHDPLEDDFTLALIDSVQRNPCVYNRYDPLHKVTDYKHEIWKLISIEIGYD   60
  61 GQPVELERKWKHMRDKYVRLRKQDKQKAPIKKTNKWYNYYHKMSFLDPYVEHRNRKRQKD  120
 121 YLNSNTPDFLDDDTAFLDGLSVKEMLKPESLLTSNDAGYNSPHTTSSSSSSGSNNNGRFL  180
 181 DSPTIDIEDDKKNLALIYDKFVANQTENEKNHRFSNKHGKDLLFSTTNTLIEKLATTSTA  240
 241 PSSSRKRKPIPVQILPSSPPPQEKNTKIELLEDILNEPNEDQVSLFVRSIARTLNDLDRE  300
 301 KFAMARVEISKVLYKIEFGDNQYSEPVLM
Interface Residues: 22, 56, 57, 59, 102, 169, 178, 311
3D-footprint Homologues: 6we9_A, 5ond_B, 7uy7_A, 4f4y_B
Binding Motifs: M1288_1.02 stTrCGyha
			
Related annotations: PaperBLAST

	
			


			

				

				
				
				
				

			

			

		

	
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