Transcription Factor
| Accessions: | T012448_1.02 (CISBP 1.02) |
| Names: | bHLH104, T012448_1.02; |
| Organisms: | Arabidopsis thaliana |
| Libraries: | CISBP 1.02 1 1 Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. [Pubmed] |
| Notes: | experiment type:PBM, family:bHLH |
| Length: | 277 |
| Pfam Domains: | 129-175 Helix-loop-helix DNA-binding domain |
| Sequence: (in bold interface residues) | 1 MDVNLFGHDDSCSNGAELDDYTQFGVNLQTDQEDTFPDFVSYGVNLQQEPDEVFSIGASQ 60 61 LDLSSYNGVLSLEPEQVGQQDCEVVQEEEVEINSGSSGGAVKEEQEHLDDDCSRKRARTG 120 121 SCSRGGGTKACRERLRREKLNERFMDLSSVLEPGRTPKTDKPAILDDAIRILNQLRDEAL 180 181 KLEETNQKLLEEIKSLKAEKNELREEKLVLKADKEKTEQQLKSMTAPSSGFIPHIPAAFN 240 241 HNKMAVYPSYGYMPMWHYMPQSVRDTSRDQELRPPAA |
| Interface Residues: | 132, 133, 134, 136, 137 |
| 3D-footprint Homologues: | 7z5k_B, 8osb_B, 6od3_F, 1an4_A, 8ia3_B, 5gnj_I |
| Binding Motifs: | M0159_1.02 GGCACGTGCC |
| Related annotations: | PaperBLAST |
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