Transcription Factor

						

			
Accessions: 7ce1_P (3D-footprint 20231221)

			
Names: A0A2I4PGE9_RHIRD, Fragment, LacI-type transcription factor
Organisms: Agrobacterium tumefaciens A6
Libraries: 3D-footprint 20231221 1
1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed]
Uniprot: A0A2I4
Length: 324
Pfam Domains:      4-49 Bacterial regulatory proteins, lacI family
   75-306 Periplasmic binding proteins and sugar binding domain of LacI family
  168-313 Periplasmic binding protein-like domain
Sequence: 
(in bold interface residues)		   1 ERPTLKTIAYMTGLGITTVSRALKDAPDIGAETKERVRLIAQQIGYQPNRAGVRLRTGKT   60
  61 NVIALVLSVDEELMGFTSQMVFGITEVLATTQYHLVVTPHKDSMVPIRYILETGSADGVI  120
 121 ISKIEPNDPRVRFMTERKMPFVTHGRSDMGIEHAYHDFDNEAYAYEAVERLAQCGRKRIA  180
 181 IIVPPSRFAFHDHARKGFTRGIRDFGVSEFPLDAITIETPLDKIRDFGKRLMQSDDRPDG  240
 241 IVSISGSSTIALVAGFEAAGVRIGKIDIVSKQSAEFLNWIQPQIHTVNEDIKLAGRELAK  300
 301 ALLARINGAPPETLQSVSRPVWSS
Interface Residues: 5, 6, 15, 16, 17, 18, 20, 21, 27, 28, 29, 52, 55, 56, 57
3D-footprint Homologues: 1efa_B, 3oqm_C, 7ce1_D, 1l1m_B, 1zvv_A, 1jft_A
Binding Motifs: 7ce1_OP TCTGCAACGTTGCAGA
Binding Sites: 7ce1_o / 7ce1_p
			
Publications: Ye F, Wang C, Fu Q, Yan XF, Bharath SR, Casanas A, Wang M, Song H, Zhang LH, Gao YG. Structural basis of a novel repressor, SghR, controlling Agrobacterium infection by cross-talking to plants. J Biol Chem 295:12290-12304 (2020). [Pubmed]
Related annotations: PaperBLAST

	
			


			

				

				
				
				
				

			

			

		

	
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