Transcription Factor
| Accessions: | Q95TF1 (JASPAR 2024) |
| Names: | Q95TF1_DROME |
| Organisms: | Drosophila melanogaster |
| Libraries: | JASPAR 2024 1 1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed] |
| Uniprot: | Q95TF1 |
| Length: | 441 |
| Pfam Domains: | 229-284 Zinc-finger associated domain (zf-AD) |
| Sequence: (in bold interface residues) | 1 MNNVPHKFRQVCRLCLTLVNECDVAVLQIYDNSSHNNSAPDRISADFRGVANRANCFCSA 60 61 LSPNPCSCIVDNPLSANKNERRNQGTPVPVPIPIPVSVPVPVPSQQIQSQTLHHHQNQTK 120 121 IHYTPSVPSAADAKSSERERQCQLESDIAERSTVFKSQSSSDHEHIEYSGETPSPSASLS 180 181 QSQTKSEPMREEEEHQHNHNQQSGREETSVNTTNISGTDNYGKEHGRDDSSSPHLTFQIF 240 241 NCLSIKALPNDGLPNVVCGDCRQKLDSFEKFRTMAHNSQIALKEFLNISKNLRPDPNDLE 300 301 TKLDAILKASSEAIAAKALTELSTFSKVKYDHSKLDSSIQPGLDRKIEISNQEMPAHSLY 360 361 PSLFKSITMKSDQKSKAMSGSSHSQFDSKLQKDSDIEKYENLQQQLETAAVLMDIKKKNS 420 421 NFPSMFESAISVFFCSCRYKY |
| Interface Residues: | 399 |
| 3D-footprint Homologues: | 5v9x_A |
| Binding Motifs: | MA1839.1 wwCTTATCAgw MA1839.2 CTTATCA |
| Binding Sites: | MA1839.1.1 MA1839.1.10 MA1839.1.11 MA1839.1.12 MA1839.1.13 / MA1839.1.14 MA1839.1.14 / MA1839.1.15 MA1839.1.15 / MA1839.1.16 MA1839.1.16 / MA1839.1.18 MA1839.1.17 / MA1839.1.20 MA1839.1.18 MA1839.1.19 MA1839.1.2 MA1839.1.20 MA1839.1.3 MA1839.1.4 MA1839.1.4 / MA1839.1.5 MA1839.1.5 / MA1839.1.6 MA1839.1.6 / MA1839.1.7 MA1839.1.7 / MA1839.1.8 MA1839.1.9 MA1839.2.2 MA1839.2.16 / MA1839.2.17 / MA1839.2.7 MA1839.2.14 / MA1839.2.19 MA1839.1.13 MA1839.1.17 MA1839.1.19 MA1839.1.8 MA1839.2.1 / MA1839.2.5 MA1839.2.10 / MA1839.2.11 MA1839.2.12 / MA1839.2.18 / MA1839.2.6 MA1839.2.13 / MA1839.2.15 / MA1839.2.3 MA1839.2.20 / MA1839.2.9 MA1839.2.4 MA1839.2.8 |
| Publications: | Zhu LJ, Christensen RG, Kazemian M, Hull CJ, Enuameh MS, Basciotta MD, Brasefield JA, Zhu C, Asriyan Y, Lapointe DS, Sinha S, Wolfe SA, Brodsky MH. FlyFactorSurvey: a database of Drosophila transcription factor binding specificities determined using the bacterial one-hybrid system. Nucleic Acids Res : (2011). [Pubmed] |
| Related annotations: | PaperBLAST |
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.