Transcription Factor
| Accessions: | T023868_1.02 (CISBP 1.02) |
| Names: | GBF1, T023868_1.02; |
| Organisms: | Arabidopsis thaliana |
| Libraries: | CISBP 1.02 1 1 Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. [Pubmed] |
| Notes: | experiment type:PBM, family:bZIP |
| Length: | 313 |
| Pfam Domains: | 1-159 G-box binding protein MFMR 218-280 bZIP transcription factor 220-271 Basic region leucine zipper |
| Sequence: (in bold interface residues) | 1 MGTSEDKMPFKTTKPTSSAQEVPPTPYPDWQNSMQAYYGGGGTPNPFFPSPVGSPSPHPY 60 61 MWGAQHHMMPPYGTPVPYPAMYPPGAVYAHPSMPMPPNSGPTNKEPAKDQASGKKSKGNS 120 121 KKKAEGGDKALSGSGNDGASHSDESVTAGSSDENDENANQQGSIRKPSFGQMLADASSQS 180 181 TTGEIQGSVPMKPVAPGTNLNIGMDLWSSQAGVPVKDERELKRQKRKQSNRESARRSRLR 240 241 KQAECEQLQQRVESLSNENQSLRDELQRLSSECDKLKSENNSIQDELQRVLGAEAVANLE 300 301 QNAAGSKDGEGTN |
| Interface Residues: | 226, 227, 229, 230, 231, 233, 234, 235, 237, 238 |
| 3D-footprint Homologues: | 1gd2_G, 2wt7_A, 4eot_A, 7x5e_E, 1nwq_C, 6mg1_B, 2c9l_Z, 1dh3_C, 2dgc_A |
| Binding Motifs: | M0268_1.02 ysACGTGkmm |
| Related annotations: | PaperBLAST |
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