Transcription Factor
| Accessions: | T037032_1.02 (CISBP 1.02) |
| Names: | T037032_1.02;, ZAT7 |
| Organisms: | Arabidopsis thaliana |
| Libraries: | CISBP 1.02 1 1 Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. [Pubmed] |
| Notes: | experiment type:PBM, family:C2H2 ZF |
| Length: | 168 |
| Pfam Domains: | 39-64 C2H2-type zinc finger 86-110 C2H2-type zinc finger |
| Sequence: (in bold interface residues) | 1 MVARSEEIVIVEEDTTAKCLMLLSRVGECGGGCGGDERVFRCKTCLKEFSSFQALGGHRA 60 61 SHKKLINSDNPSLLGSLSNKKTKTSHPCPICGVKFPMGQALGGHMRRHRNEKVSGSLVTR 120 121 SFLPETTTVTALKKFSSGKRVACLDLDLDSMESLVNWKLELGRTISWS |
| Interface Residues: | 40, 50, 51, 52, 53, 54, 56, 57, 58, 66, 67, 69, 70, 71, 72, 75, 78, 80, 82, 85, 96, 97, 99, 100, 101, 103, 104, 107, 124, 125, 126, 127, 130 |
| 3D-footprint Homologues: | 2kmk_A, 1g2f_F, 7ysf_A, 1llm_D, 5v3j_F, 2drp_D, 2lt7_A, 6ml4_A, 5yel_A, 7txc_E, 7y3l_A, 8h9h_G, 7n5w_A |
| Binding Motifs: | M0373_1.02 mhhbAGTGtrmtg |
| Related annotations: | PaperBLAST |
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