Transcription Factor
| Accessions: | T001945_1.02 (CISBP 1.02) |
| Names: | PFL1900w, T001945_1.02; |
| Organisms: | Plasmodium falciparum |
| Libraries: | CISBP 1.02 1 1 Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. [Pubmed] |
| Notes: | experiment type:PBM, family:AP2 |
| Length: | 2577 |
| Pfam Domains: | 2151-2199 AP2 domain 2288-2340 AP2 domain |
| Sequence: (in bold interface residues) | 1 MSDKGEGDKDNMNKNGNVYDMMDNEKNEEVNYIINEVDSSNDCKNELIKMNYDNNNNDNN 60 61 NNNNNNNNDISYNVLNSNSVDTKNMENSCKNYVYDKDIENRDTYDNSNNKSNKSDDVDNK 120 121 TGDISMNKNKLVNTNIYNSEENIYPCTYNTVVENNAYLKNIDIINTIENVEDNNMKNDVC 180 181 NENNNIINNLYVDNDNWEKKNYVGLTEKLNCLKLEKTNEILEFNKTLDTSKDTQDINVVN 240 241 EKLSVESNKNNVISNMNNIDSIDNINKMDNIDCIDNMNNIEKQSRKRKKNKLSDKKNLLN 300 301 NEEYDNKENYDNLHVGNNYINTKDEINKVIQNINLLKALNTNDQKVNELNMDILNKSNEH 360 361 NDNNEISKQLLDNIILLNSLSKYMNKDDINKQAKEKMKNRISKKKMTLEGTQLCKINKEQ 420 421 NDNMLNENNNIDDDNNDQHSKLSDYDNNMMNPHGVLNNSSGEIISSNCSNHLNYNNNDNN 480 481 NDNNNNNNIIINKDVCNNKKNKKNSKKQTILCAKNNKGILENEDNKQLNDIRNKIYELTT 540 541 NNYNSLNEANNENLQKKILLASGLLSSTDIMNPTDSEANNPLYNNFDKDTLLLINQMKDE 600 601 EKHVLRNYLMNDANNKIGMGTRIVSKRKKQGSNLVNSNNNMNNLNDLNNNYEMKHNREYV 660 661 GDNNVTTSNDNMNNNNNINISKKKKKINNIMDDKTQDLLDYQNTANLLNNVLNNNEKDVR 720 721 NISMNILKNNINACNNDEEIIKALINNIGYSHEHNNNIVGNVKNIINLNRGKDNSLNEFS 780 781 IVNDYIANIYECAQKDYLHNDKNNKNKNNIHMDNPLASNLININREEQMNFVNRLNMLMN 840 841 EADINKKGLLEAYMRKYSNININGNNNINNNSNNNNLQSLNNQENILNNEQDNTSLSSQE 900 901 KKLSYNDMLLNLKKRNVLEEFPFNFVKQKDDSAKNTMNDSSDTQVDIHMDHGFKEGNKKQ 960 961 EKLNSYVQEKFNYEVEKGENVQGEEEKYKQKYLTNEDKNVNVNNDDDDDNYNNSSRSNRK 1020 1021 NCDKNKKTNDNNMSSEEIEHNDEKHNENYFKEWYKNISDQVRKLLIESGTNKNVFTENEK 1080 1081 NKLLLNIAKEYLLKNNVNEKKKKKHTKNKNELNSNVENHNVFSDQYDDINNVLLNMQNGN 1140 1141 INDITNKNIMNYEHNSTSIHPTIASTLFDINHENPREHIKSECSTINNNYNNNNYNNNKN 1200 1201 YYLDYIKRLTQNNNNNENLLNIFENSKKYKKKNLSNTSLNSLNNEINEINEILNEKFETT 1260 1261 ESFDKYENSQQNIMKNKYNSNNINNNINSNNNIHNDEEERNILCNTNYQVNIKNDVKEEK 1320 1321 VKERKVRKSRKNQNFVEDKKKKKNKDNNLNNGDSNNTHNKNNNTYDNNTHDNIYYDQIKT 1380 1381 LQELHYQNAIVNSLMNGNNIEVCNMNNSKDIFKKKKNEDNEYINYKEQNNDERKKKMKDN 1440 1441 NKGNKVDKKKKDEEFFNHINVLKVRDNDISHSNNNNDDDHDDNNNDNNNNIINNNNDDKF 1500 1501 THNINVLNNNEEKINIPYKPNEHKINIMIDESHFSGKEKELFIKGKETLLLEGMNDGKLD 1560 1561 DDIENIDMTRNIKKINLYNIYNNKNDDKDNILDNENREGLYLCDVMKNSNELKRINDNFF 1620 1621 KLHSNLASNLLSTSTSGSFGNDNYKSTPLNFDMNKLPSNNTFNNLYYMDENIITNNINVI 1680 1681 PLVNKNYSDISSSYDIKKKNLHKNKKKHKNHINDNNIINVDYNMKGADNINNINSNMINV 1740 1741 KNMNSNDEKPTTSTENMFPSHSTNINDSNIVKVVDSHDSINNHEEGLVNALNTIKADKSN 1800 1801 GENSYSILDSNDVMIKKLMLKNNLLFEHLQKNGKFNKDENIKNASQSSLHSNIIRNLTLT 1860 1861 NNFQNDYFYNGVKNGSFNNVLNKEKKMMNSYDEQQLKEKIASLKEQNENILNKKMLFKNK 1920 1921 SYSDNDNFLSFYLKRKVSSFSDYNKESDNNSYLTKQKRKRKNENINYDKNKEFLVNRTNS 1980 1981 LNIKRVRSGPLDNSQNVSQSNVHTYGTAKEIIDVDVLDENMNSNNSYNIKGGDNIISSNF 2040 2041 TDPLKFTETSFDVQKESLIKESNENQTVLKEKDENLVDVKDDKTNQMSNVTTIGTSNLAE 2100 2101 STTKNEIDIKVCTLINCPTHNPQNYVKSNGKRGESLGDGMELKEENDDLKRIPGVYYDKN 2160 2161 SQRWFGEHKINGVKCAQSFAVKKHGCEEAKRLAIEWKKARIRGEVWDRFINKKKKNTNNN 2220 2221 NNNNNNNNNNNSNNNSNNNNNSSNNNNNNNNNNSGSNSNNNSLKGSKSNRPSVEELRLKY 2280 2281 LSMSKNMPKVRGVWFNSTPQRMGWVGQAYKKCKRIERIFSVNKYGFEGARKLAIAFRNSQ 2340 2341 KPANEDSDDDSWSKEDKINIKNCDENSNNYDYKNNFLVSMNTIKNNGSNIMSNDNNINNH 2400 2401 SNNSNDNNHHMDNNLEAQIENNTDMIMDSNMDNDIDMNIDKKNIINKHNNHDENNKDMRI 2460 2461 NLCRDAILFILHDLETILELNIPMLSKNVNMYKLCIKHHLNYLTLIKNEEQIIPYLNVFG 2520 2521 DYIQRCILPTDLPYAELYVLIDSLIHNEILPSYDHKENFCEYVAVEDPGIITPSMLL |
| Interface Residues: | 220, 221, 224, 237 |
| 3D-footprint Homologues: | 6p4f_C |
| Binding Motifs: | M0069_1.02 TTGTAGAA M0070_1.02 gaTrTmGw |
| Related annotations: | PaperBLAST |
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