Transcription Factor

Accessions: 1zme_C (3D-footprint 20231221), 1zme_D (3D-footprint 20231221)
Names: PROLINE UTILIZATION TRANSCRIPTION ACTIVATOR, PUT3_YEAST
Organisms: Saccharomyces cerevisiae, Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
Libraries: 3D-footprint 20231221 1
1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed]
Uniprot: P25502
Length: 70
Pfam Domains: 3-38 Fungal Zn(2)-Cys(6) binuclear cluster domain
Sequence:
(in bold interface residues)
1 SVACLSCRKRHIKCPGGNPCQKCVTSNAICEYLEPSKKIVVSTKYLQQLQKDLNDKTEEN 60
61 NRLKALLLER
Interface Residues: 10, 11, 12, 37, 39, 40
3D-footprint Homologues: 1hwt_C, 1pyi_A, 6o19_A, 2er8_C, 7uik_T, 3coq_A, 6gys_C, 1zme_D, 1d66_B
Binding Motifs: 1zme_CD CGGnnnnCcannnCCG
1zme_D CcannnCCG
Binding Sites: 1zme_A
1zme_B
Publications: Swaminathan K, Flynn P, Reece R.J, Marmorstein R. Crystal structure of a PUT3-DNA complex reveals a novel mechanism for DNA recognition by a protein containing a Zn2Cys6 binuclear cluster. Nature structural biology 4:751-9 (1997). [Pubmed]
Related annotations: PaperBLAST

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