Transcription Factor
| Accessions: | UP00041A (UniPROBE 20160601) |
| Names: | FKHL-13, Fkhl13, forkhead box J1, Forkhead box protein J1, Forkhead-related protein FKHL13, Foxj1, Hepatocyte nuclear factor 3 forkhead homolog 4, HFH-4, Hfh4 |
| Organisms: | Mus musculus |
| Libraries: | UniPROBE 20160601 1 1 Hume MA, Barrera LA, Gisselbrecht SS, Bulyk ML. UniPROBE, update 2015: new tools and content for the online database of protein-binding microarray data on protein-DNA interactions. Nucleic Acids Res : (2015). [Pubmed] |
| Uniprot: | Q61660 |
| Description: | forkhead box J1: forkhead box J1 [Mus musculus] |
| Length: | 128 |
| Pfam Domains: | 18-111 Fork head domain |
| Sequence: (in bold interface residues) | 1 LQAPPPDDVDYATNPHVKPPYSYATLICMAMQASKATKITLSAIYKWITDNFCYFRHADP 60 61 TWQNSIRHNLSLNKCFIKVPREKDEPGKGGFWRIDPQYAERLLSGAFKKRRLPPVHIHPA 120 121 FARQASQE |
| Interface Residues: | 58, 61, 63, 64, 65, 67, 68, 69, 71, 72, 79, 81, 88, 110 |
| 3D-footprint Homologues: | 3l2c_A, 7vox_H, 2hdc_A, 6ako_C, 7yzg_A, 7tdw_A, 7yz7_A, 6el8_A, 2uzk_A, 7tdx_A, 2a07_J, 7yzb_A, 6nce_A, 3co6_C, 7vou_C, 2c6y_A, 7yze_A, 7cby_C, 3g73_A, 3qrf_G, 4qtr_D |
| Binding Motifs: | UP00041A_1 awwrTAAACAaAmdkk UP00041A_2 ayrtcAyAACAacac |
| Binding Sites: | GTAAACAA AAACAAAA AAACAAAC AACAAAAC AACAAACA ACAAACAA ACAACAAA AGTAAACA ATAAACAA ATAAACAT CAAACAAA CAACAAAA CAACAAAC CACAACAA GTAAACAC GTCAACAA TAAACAAA TAAACACA TAAACATA TCAACAAA |
| Publications: | Badis G, Berger M.F, Philippakis A.A, Talukder S, Gehrke A.R, Jaeger S.A, Chan E.T, Metzler G, Vedenko A, Chen X, Kuznetsov H, Wang C.F, Coburn D, Newburger D.E, Morris Q, Hughes T.R, Bulyk M.L. Diversity and complexity in DNA recognition by transcription factors. Science (New York, N.Y.) 324:1720-3 (2009). [Pubmed] |
| Related annotations: | PaperBLAST |
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