Transcription Factor
| Accessions: | UP00011A (UniPROBE 20160601) |
| Names: | AI876454, E230028I05Rik, interferon regulatory factor 6, Irf6, mirf6 |
| Organisms: | Mus musculus |
| Libraries: | UniPROBE 20160601 1 1 Hume MA, Barrera LA, Gisselbrecht SS, Bulyk ML. UniPROBE, update 2015: new tools and content for the online database of protein-binding microarray data on protein-DNA interactions. Nucleic Acids Res : (2015). [Pubmed] |
| Uniprot: | Q8C2Z7 |
| Description: | interferon regulatory factor 6 |
| Length: | 132 |
| Pfam Domains: | 6-114 Interferon regulatory factor transcription factor |
| Sequence: (in bold interface residues) | 1 ALHPRRVRLKPWLVAQVDSGLYPGLIWLHRDSKRFQIPWKHATRHSPQQEEENTIFKAWA 60 61 VETGKYQEGVDDPDPAKWKAQLRCALNKSREFNLMYDGTKEVPMNPVKIYQVCDIPQTQG 120 121 SVINPGSTGSAP |
| Interface Residues: | 41, 43, 76, 80, 81, 83, 84, 87, 88 |
| 3D-footprint Homologues: | 1if1_B, 2o61_A, 2pi0_B, 2irf_L, 7oot_B |
| Binding Motifs: | UP00011A_1 mwdayCGAWACyaaakw UP00011A_2 mbywcTCyCGgkcrs |
| Binding Sites: | AACGAAAC ACCGAAAC ACCGATAC ACGAAACC AGTATCGG AGTTTCGA AGTTTCGG ATCGAAAC ATCGATAC CAGTTTCG CCGAAACC CCGATACC CGAAACCA CGAAACCG CGAAACTA CGAAACTC CGATACCA CGATACTA GGTATCGA GGTTTCGA |
| Publications: | Badis G, Berger M.F, Philippakis A.A, Talukder S, Gehrke A.R, Jaeger S.A, Chan E.T, Metzler G, Vedenko A, Chen X, Kuznetsov H, Wang C.F, Coburn D, Newburger D.E, Morris Q, Hughes T.R, Bulyk M.L. Diversity and complexity in DNA recognition by transcription factors. Science (New York, N.Y.) 324:1720-3 (2009). [Pubmed] |
| Related annotations: | PaperBLAST |
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