Transcription Factor
| Accessions: | T128341_1.02 (CISBP 1.02) |
| Names: | T128341_1.02;, XM_002871237.1 |
| Organisms: | Arabidopsis lyrata |
| Libraries: | CISBP 1.02 1 1 Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. [Pubmed] |
| Notes: | experiment type:PBM, family:NAC/NAM |
| Length: | 332 |
| Pfam Domains: | 17-142 No apical meristem (NAM) protein |
| Sequence: (in bold interface residues) | 1 METFGVFHKEDDEQMDLPPGFRFHPTDEELITHYLHKKVLDISFAAKAIGEVDLNKAEPW 60 61 ELPYKAKMGEKEWYFFCVRDRKYPTGLRTNRATQAGYWKATGKDKEIFRGKSLVGMKKTL 120 121 VFYRGRAPKGQKTNWVMHEYRLDGKLSAHNLPKTAKNEWVICRVFHKTAGGKKIPISTLI 180 181 RIGSYGTGSSLPPLTDSSPYNDKTKTEPVYVPCFSNHAETRGTILNCFSNPSLSSVQPDF 240 241 LQMIPLYQPQSLNILENLQSSNPVLSQDQSVLQAMVENNRRQNFKTLSISQETEVSNTDN 300 301 SSVFEFGRKRFDHQEVPSSSSGPVDLEPFWNY |
| Interface Residues: | 83, 88, 90, 99, 101, 103, 123, 127, 128, 129, 132 |
| 3D-footprint Homologues: | 7xp3_B, 3swp_A |
| Binding Motifs: | M1409_1.02 ryAmgyhAyc |
| Related annotations: | PaperBLAST |
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