Transcription Factor
| Accessions: | Carub.0006s0445.1.p (EEADannot 2026-03-04) |
| Names: | VPF5 |
| Organisms: | Capsella rubella |
| Libraries: | EEADannot 2026-03-04 1 1 Contreras-Moreira B, Sebastian A. FootprintDB: Analysis of Plant Cis-Regulatory Elements, Transcription Factors, and Binding Interfaces. Methods Mol Biol 1482:259-77 (2016) [Pubmed] |
| Notes: | family:TRIHELIX |
| Length: | 243 |
| Pfam Domains: | 21-106 Myb/SANT-like DNA-binding domain 37-107 Alcohol dehydrogenase transcription factor Myb/SANT-like |
| Sequence: (in bold interface residues) | 1 METTPQSKASGSHRPPLGREDWWSEEATATLVEAWGNRYVKLNHGNLRQNDWKDVADTVN 60 61 SRHGDYVRAKTDVQCKNRIDTLKKKYKSEKAKLSPSTWRFFDRLDFLIGPVVKKSAGGVI 120 121 KSVPIVNPNHLNPAGSGSSLEDDDDDDDDETGDWGFVAREHSRVEEIDLSEGSTCRELAT 180 181 AILKFGEVYEKIEGKKQQMMIELEKQRMEVIKEVELQRMNMLMEMQLEIEKSKLRKRGLG 240 241 SGM |
| Interface Residues: | 64, 67, 68 |
| 3D-footprint Homologues: | 4ofa_A |
| Binding Motifs: | EEAD0616 CrCCGGMr |
| Related annotations: | PaperBLAST |
Disclaimer and license
These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.