Transcription Factor
| Accessions: | Solyc11g064950.3.1 (EEADannot 2026-03-04) |
| Names: | TGA6 |
| Organisms: | Solanum lycopersicum |
| Libraries: | EEADannot 2026-03-04 1 1 Contreras-Moreira B, Sebastian A. FootprintDB: Analysis of Plant Cis-Regulatory Elements, Transcription Factors, and Binding Interfaces. Methods Mol Biol 1482:259-77 (2016) [Pubmed] |
| Notes: | family:Basic leucine zipper factors (bZIP) bZIP |
| Length: | 324 |
| Pfam Domains: | 37-80 bZIP transcription factor 38-82 Basic region leucine zipper 121-199 Seed dormancy control |
| Sequence: (in bold interface residues) | 1 MADISPSTSTDADTEDKNRFLNQQLCAVASDGSDRPKDQKTLRRLAQNREAARKSRLRKK 60 61 AYVQQLESSRMKLTQLEQELQRARQQGIFISGSGDQSQSMSGNGALAFDVEYARWLEEQN 120 121 RRINELRGAVNSHAGDAELRIIVDGILAHYDDIFRIKGDAAKADVFHILSGMWKTPAERC 180 181 FLWLGGFRSSELLKLLINQLEPLTEQQLLAINNLQQSSQQAEDALSQGMEALQQSLAETL 240 241 AGSLGPSGSSGNVANYMGQMAMAMGKLGTLEGFIRQADNLRQQTLQQMHRILTTRQSARA 300 301 LLAITDYFSRLRALSSLWLARPRE |
| Interface Residues: | 48, 51, 52, 55, 56 |
| 3D-footprint Homologues: | 1dh3_C |
| Binding Motifs: | EEAD0661 rrTGACGTCAkCat |
| Related annotations: | PaperBLAST |
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.