Transcription Factor

						

			
Accessions: T057887_1.02 (CISBP 1.02)

			
Names: sens-2, T057887_1.02;
Organisms: Drosophila melanogaster
Libraries: CISBP 1.02 1
1 Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. [Pubmed]
Notes: experiment type:B1H, family:C2H2 ZF
Length: 746
Pfam Domains:   507-530 Zinc finger, C2H2 type
  522-547 Zinc-finger double domain
  536-559 C2H2-type zinc finger
  536-558 C2H2-type zinc finger
  550-575 Zinc-finger double domain
  563-582 C2H2-type zinc finger
  564-586 Zinc finger, C2H2 type
  564-586 C2H2-type zinc finger
  579-602 Zinc-finger double domain
  592-614 Zinc finger, C2H2 type
  592-610 C2H2-type zinc finger
  607-630 Zinc-finger double domain
  619-642 C2H2-type zinc finger
  620-642 Zinc finger, C2H2 type
  620-642 C2H2-type zinc finger
  634-657 Zinc-finger double domain
  648-671 C2H2-type zinc finger
  648-671 Zinc finger, C2H2 type
  648-671 C2H2-type zinc finger
Sequence: 
(in bold interface residues)		   1 MDVAKMQATSGQHLLHPAAPPAHQHHLPLDYSLGNFKPAIASDFPGPFLTSQQSSSASNS   60
  61 ASSSAAATVPLQVRDLSALTAMATIPSPTQLLHQRIQMSADAALGHHQQQPAQNPNPNPN  120
 121 HPQPQMPPASTSPHEYAPMSAFKAVLPKKRNSDDASLAFSISRLVKTEQLTAMAAAVGLK  180
 181 PPTPLEDNNNSISMLSKNQQMHQQHHQQSHLAQRPKPAFISASEKLRRQSRSRSRSRSRS  240
 241 PCSSQIDMEDADSNHSHRSLHSRSRSRSRSRSHSRSRSHSSSSSVELEVDSPPGSPRISS  300
 301 PSGASASASELLITANGGGRSIGSKKSDLFSVSALLRRDEPPPQRRTPRSPPLGHLTSSG  360
 361 LAMPFNPLEAMRQGYPPNYDAAMFQRPLFSPALPFFAAVAFHQGQQQQQQQQQQQSGLAA  420
 421 GYHPDSQENLFRLRSLMVPLQSAGQNNSSAAAAAAAAAAAAVGVGVGVGVGVPPNGGHLG  480
 481 LPHSPHLHHFHHMAAKWPGLHQFSDLYSCMKCEKMFSTPHGLEVHSRRTHHGKKPYACEL  540
 541 CNKTFGHEVSLSQHRAVHNVEKVFECKQCGKRFKRSSTLSTHLLIHSDTRPYPCNYCGKR  600
 601 FHQKSDMKKHTYIHTGEKPHKCQVCGKAFSQSSNLITHSRKHTGYKPFSCKLCHKAFQRK  660
 661 VDLRRHKETQHTDLRVHLGKVDFMSAAAAAAASAELSAAAAAAAAAGGSVPGGGPPGSQG  720
 721 ANAVGSAPNGAPPMGGLNCQKVSLLA
Interface Residues: 518, 520, 521, 524, 546, 547, 549, 550, 553, 556, 564, 574, 575, 576, 577, 578, 580, 581, 583, 584, 587, 602, 603, 604, 605, 606, 609, 612, 630, 631, 632, 633, 634, 636, 637, 641, 658, 659, 660, 661, 662, 664, 665
3D-footprint Homologues: 5v3j_F, 1tf6_A, 8gh6_A, 7w1m_H, 8ssq_A, 8ssu_A, 7ysf_A, 6e94_A, 2kmk_A, 7n5w_A, 2gli_A, 8gn3_A, 8h9h_G, 2lt7_A, 2jpa_A, 1ubd_C, 1tf3_A, 6u9q_A, 7txc_E, 7y3m_I, 8cuc_F, 7y3l_A, 2drp_D, 1yuj_A
Binding Motifs: M5186_1.02 GvrTGChsWGATTTry
			
Related annotations: PaperBLAST

	
			


			

				

				
				
				
				

			

			

		

	
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