Transcription Factor

						

			
Accessions: T130094_1.02 (CISBP 1.02)

			
Names: MDP0000762302, T130094_1.02;
Organisms: Malus x domestica
Libraries: CISBP 1.02 1
1 Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. [Pubmed]
Notes: experiment type:PBM, family:NAC/NAM
Length: 400
Pfam Domains:    16-144 No apical meristem (NAM) protein
Sequence: 
(in bold interface residues)		   1 MSDDQMSLSINGQSQVPPGFRFHPTEEELLHYYLRKKVAFERIDLDVIREVDLNKLEPWD   60
  61 IQEKCKIGSTPQNDWYFFSHKDKKYPTGTRTNRATTAGFWKATGRDKIIYSGFKRIGLRK  120
 121 TLVFYKGRAPHGQKSDWIMHEYRLDESNTHETTVSSSMGESMTEEGWVVCRVFKKKNYQK  180
 181 ALESPKASFSMDSSNNQMHGSRNDGVLDQILMYMGRTTCKLENHDQSLTMNNISERFMHL  240
 241 PRLESPTLPNLPTFDQERSFKACYSAIDDMFIETEPSSTNQPSNGCHNNDLVDDHEYPKT  300
 301 RLNDWATLDRLVASQLGQLNGQDQETPKHLSCFGDPNMAFCSSPHPNDQDNDVQLSYPYL  360
 361 RTSRSSDHQSEVYNNENDLWNFTKSSSSPSSSDPLCHLSV
Interface Residues: 85, 90, 92, 101, 103, 105, 125, 129, 130, 131, 134
3D-footprint Homologues: 7xp3_B, 3swp_A
Binding Motifs: M1416_1.02 tkyAmgyway
			
Related annotations: PaperBLAST

	
			


			

				

				
				
				
				

			

			

		

	
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