Transcription Factor

						

			
Accessions: T161808_1.02 (CISBP 1.02)

			
Names: NCU08527, T161808_1.02;
Organisms: Neurospora crassa
Libraries: CISBP 1.02 1
1 Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. [Pubmed]
Notes: experiment type:PBM, family:Zinc cluster
Length: 554
Pfam Domains:     12-61 Fungal Zn(2)-Cys(6) binuclear cluster domain
Sequence: 
(in bold interface residues)		   1 MPRKPVLQSRLACDRCHSQKLRCPRQDNYRTTKDGTSEQPAPCVRCERAKVACVFSPRQR   60
  61 RTVIPKLAGASKPPPPPNHDIANNADATPASTGPALTQTAPTVVENGKDNSVEVESAPCT  120
 121 LENPLPTTTATPTGTQLFNVTDLGQDFYGSSYFENNQFHLQQPSSGSCSNPSTTCTDLCP  180
 181 LSLDTTTAIDWDNLLLCDPLLPPSRGWSLLDIDKSLLPPPAPDPFFPPHGPPLPLNLMSS  240
 241 TSNSDIDPILFHPSANPSVDYSNPQALTPYSPVRQLANLNVSLYEHLCVIPQIYSNCGLP  300
 301 PLTPVVRVDLLEKRLLAIDHTFQLTQELIDIVGKLYPRSGPGVLSGDDAPDVPKTGTGMP  360
 361 LGQDQATILLLLSCAQRVCDVYDLSLSQMRKCLKKNSVPHFDEELKPVRLPPFRISAVCA  420
 421 PPTDRAVALHMCMVMMMASNLFDQLQEVLGLWRHSSGQEQQQHSELEMQVDLQYPDFGRE  480
 481 AKEKMGKKARDVAMEIVTIRQIIVSFSGLGMEDTRQAVLELESGGGGGVKKAIGEVRSLA  540
 541 LEGCCSQSLGEECY
Interface Residues: 8, 19, 20, 21, 61
3D-footprint Homologues: 6o19_A, 2er8_C, 1d66_B, 7uik_T, 3coq_A
Binding Motifs: M1760_1.02 cwrCGCCGrmk
			
Related annotations: PaperBLAST

	
			


			

				

				
				
				
				

			

			

		

	
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