Transcription Factor
| Accessions: | UP00523A (UniPROBE 20160601) |
| Names: | FoxN5, FOXR1 |
| Organisms: | Homo sapiens |
| Libraries: | UniPROBE 20160601 1 1 Hume MA, Barrera LA, Gisselbrecht SS, Bulyk ML. UniPROBE, update 2015: new tools and content for the online database of protein-binding microarray data on protein-DNA interactions. Nucleic Acids Res : (2015). [Pubmed] |
| Length: | 135 |
| Pfam Domains: | 16-108 Fork head domain |
| Sequence: (in bold interface residues) | 1 RRLRQASSQAGRLWSRPPLNYFHLIALALRNSSPCGLNVQQIYSFTRKHFPFFRTAPEGW 60 61 KNTVRHNLCFRDSFEKVPVSMQGGASTRPRSCLWKLTEEGHRRFAEEARALASTRLESIQ 120 121 QCMSQPDVMPFLFDL |
| Interface Residues: | 56, 59, 61, 62, 63, 65, 66, 67, 69, 70, 88, 90 |
| 3D-footprint Homologues: | 3l2c_A, 7vox_H, 2hdc_A, 6el8_A, 7tdx_A, 7yzb_A, 6nce_A, 2uzk_A, 7vou_C, 2a07_J, 7yze_A, 7cby_C, 3co6_C, 6ako_C, 2c6y_A, 7yzg_A, 7tdw_A, 3g73_A, 7yz7_A, 3qrf_G |
| Binding Motifs: | UP00523A_1 scctcdmrCAAACAahyawkrk UP00523A_2 cmymvykArGACGCCAavwgasg |
| Binding Sites: | AACAAACA ACAAACAA ATTGTTTG CAAACAAA CAAACAAC GCAAACAA AAGTTTGC ACAAACAC ACAAACAG AGCAAACA AGGCAAAC AGTGTTTG ATCAAACA ATGTTTGC CACAAACA CGCAAACA GACAAACA GGCAAACA GTCAAACA TCAAACAA |
| Publications: | Nakagawa S, Gisselbrecht SS, Rogers JM, Hartl DL, Bulyk ML. DNA-binding specificity changes in the evolution of forkhead transcription factors. Proc Natl Acad Sci U S A 110:12349-54 (2013). [Pubmed] |
| Related annotations: | PaperBLAST |
Disclaimer and license
These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.