footprintDB - a database of transcription factors with annotated cis elements (DNA motifs and sites) and binding interfaces

Transcription Factor

Accessions:	Q2R3N4 (JASPAR 2024)
Names:	cDNA, clone: J075106F03, full insert sequence, NAM protein, No apical meristem protein, Os11g0512100 protein, Q2R3N4_ORYSJ
Organisms:	Oryza sativa
Libraries:	JASPAR 2024 ¹ ¹ Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Uniprot:	Q2R3N4
Length:
Binding Motifs:	UN0428.1 ywGCTGCCcc UN0429.1 rgAGGAAGAyv UN0430.1 dgAAGAAAAGgr UN0428.2 GCTGCCc UN0429.2 AGGAAGA UN0430.2 AAGAAAAG
Binding Sites:	UN0429.2.8 UN0430.2.19 / UN0430.2.9 UN0428.1.1 / UN0428.1.2 / UN0428.1.3 UN0428.1.10 / UN0428.1.14 UN0428.1.11 / UN0428.1.16 UN0428.1.12 / UN0428.1.18 UN0428.1.13 / UN0428.1.20 UN0428.1.14 UN0428.1.15 / UN0428.1.16 UN0428.1.17 UN0428.1.18 UN0428.1.19 UN0428.1.20 UN0428.1.11 / UN0428.1.4 / UN0428.1.5 / UN0428.1.6 / UN0428.1.9 UN0428.1.6 / UN0428.1.7 UN0428.1.7 / UN0428.1.8 UN0428.1.8 / UN0428.1.9 UN0429.1.1 UN0429.1.10 / UN0429.1.12 / UN0429.1.13 / UN0429.1.15 / UN0429.1.18 UN0429.1.11 / UN0429.1.14 / UN0429.1.15 / UN0429.1.19 UN0429.1.13 / UN0429.1.17 UN0429.1.14 / UN0429.1.18 UN0429.1.16 / UN0429.1.20 UN0429.1.17 UN0429.1.19 / UN0429.1.20 UN0429.1.2 / UN0429.1.4 / UN0429.1.5 / UN0429.1.6 / UN0429.1.9 UN0429.1.11 / UN0429.1.3 / UN0429.1.4 / UN0429.1.5 / UN0429.1.7 UN0429.1.8 UN0429.1.12 / UN0429.1.9 UN0430.1.1 UN0430.1.10 / UN0430.1.13 UN0430.1.11 / UN0430.1.14 / UN0430.1.15 / UN0430.1.18 / UN0430.1.5 / UN0430.1.7 / UN0430.1.8 UN0430.1.12 / UN0430.1.16 UN0430.1.13 / UN0430.1.17 / UN0430.1.8 / UN0430.1.9 UN0430.1.15 / UN0430.1.19 UN0430.1.16 / UN0430.1.20 UN0430.1.17 UN0430.1.18 UN0430.1.19 UN0430.1.2 UN0430.1.20 UN0430.1.3 / UN0430.1.4 / UN0430.1.6 UN0430.1.11 / UN0430.1.9 UN0429.1.16 / UN0429.1.8 UN0428.1.10 UN0428.1.12 UN0428.1.13 UN0428.1.15 UN0428.1.17 UN0428.1.19 UN0428.1.5 UN0428.2.1 / UN0428.2.10 / UN0428.2.14 / UN0428.2.2 / UN0428.2.3 / UN0428.2.4 / UN0428.2.5 / UN0428.2.6 / UN0428.2.7 / UN0428.2.8 / UN0428.2.9 UN0428.2.11 / UN0428.2.13 UN0428.2.12 / UN0428.2.17 / UN0428.2.18 / UN0428.2.19 UN0428.2.15 / UN0428.2.16 / UN0428.2.20 UN0429.1.10 / UN0429.1.3 / UN0429.1.6 UN0429.2.1 UN0429.2.10 / UN0429.2.12 / UN0429.2.18 UN0429.2.11 / UN0429.2.15 UN0429.2.13 / UN0429.2.16 / UN0429.2.17 / UN0429.2.3 / UN0429.2.5 / UN0429.2.7 / UN0429.2.9 UN0429.2.14 UN0429.2.19 / UN0429.2.20 UN0429.2.2 / UN0429.2.4 / UN0429.2.6 UN0430.1.10 / UN0430.1.12 UN0430.1.14 UN0430.1.7 UN0430.2.1 / UN0430.2.2 UN0430.2.10 UN0430.2.11 / UN0430.2.14 / UN0430.2.5 / UN0430.2.7 UN0430.2.12 / UN0430.2.20 UN0430.2.13 / UN0430.2.8 UN0430.2.15 UN0430.2.16 / UN0430.2.18 UN0430.2.17 UN0430.2.3 / UN0430.2.4 / UN0430.2.6
Related annotations:	PaperBLAST

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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.

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