Transcription Factor
| Accessions: | T075020_1.02 (CISBP 1.02) |
| Names: | CBG09413, T075020_1.02; |
| Organisms: | Caenorhabditis briggsae |
| Libraries: | CISBP 1.02 1 1 Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. [Pubmed] |
| Notes: | experiment type:PBM, family:DM |
| Length: | 264 |
| Pfam Domains: | 36-82 DM DNA binding domain |
| Sequence: (in bold interface residues) | 1 MTQIGLYPAALTKPFELSLSAIKSVLEPENPSYSKRVPNCQKCGQHGRKSRLKGHKRSCP 60 61 FRECPCAKCAVVTERQKLMADQIKIRRRQRKDTLMNLTREHITSTINAAAAFSNSQISLQ 120 121 SLNSLLYGSIKASPQPLLSSPTSSDGSSYSPSLQFPSPPIPMMIPTSADHSPNSQTPTSI 180 181 ATSIASSTPIMAPLPMTAAGFPFIGLPQQQPDTTLLIQALLDHYRLLEEAGSMSISSSPS 240 241 KDDDSGDEDSDGLNSNAIIDVCTV |
| Interface Residues: | 36, 72, 75, 76, 79, 82, 83, 86, 87 |
| 3D-footprint Homologues: | 4yj0_C, 8gd7_A, 8e24_A, 4x0p_B |
| Binding Motifs: | M0625_1.02 AATGTTTC |
| Related annotations: | PaperBLAST |
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